RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 AKAP3O75969 853 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 SMAD1Q15797 465 aaKnown RBP14.87□□□□□ -0.03
COL6A1-201ENST00000361866 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.87□□□□□ -0.03
COL6A1-201ENST00000361866 ARHGEF1Q92888 912 aaKnown RBP14.87□□□□□ -0.03
COL6A1-201ENST00000361866 VCX3BQ9H321 246 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 SEMA4AQ9H3S1 761 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 NXF1Q9UBU9 619 aaKnown RBP14.87□□□□□ -0.03
COL6A1-201ENST00000361866 APEX2Q9UBZ4 518 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 SEPT9Q9UHD8 586 aaPredicted RBP14.87□□□□□ -0.03
COL6A1-201ENST00000361866 ZNF263O14978 683 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 MED24O75448 989 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 STAM2O75886 525 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 BBOX1O75936 387 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 AGTP01019 485 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 ARL1P40616 181 aaPredicted RBP14.87□□□□□ -0.03
COL6A1-201ENST00000361866 EDRF1Q3B7T1 1238 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 LARGE2Q8N3Y3 721 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 DTX3LQ8TDB6 740 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 ERP27Q96DN0 273 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 H0YIN7 160 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 PPEF1O14829 653 aaPredicted RBP14.87□□□□□ -0.03
COL6A1-201ENST00000361866 GYG2O15488 501 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 MIIPQ5JXC2 388 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 LXNQ9BS40 222 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 TDRD3Q9H7E2 651 aaKnown RBP14.87□□□□□ -0.03
COL6A1-201ENST00000361866 ZWILCHQ9H900 591 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 BLOC1S4Q9NUP1 217 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 TTLL3Q9Y4R7 772 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 BAG6P46379 1132 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 OSTNP61366 133 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 ZNF844Q08AG5 666 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 ORC2Q13416 577 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-201ENST00000361866 SCARA5Q6ZMJ2 495 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 KRT27Q7Z3Y8 459 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 PNMA5Q96PV4 448 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 PABPC3Q9H361 631 aaKnown RBP14.86□□□□□ -0.03
COL6A1-201ENST00000361866 G3BP2Q9UN86 482 aaKnown RBP14.86□□□□□ -0.03
COL6A1-201ENST00000361866 CFAP73A6NFT4 308 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 RNF8O76064 485 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 POLGP54098 1239 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-201ENST00000361866 BPIFB4P59827 614 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 HADHQ16836 314 aaKnown RBP14.86□□□□□ -0.03
COL6A1-201ENST00000361866 IZUMO3Q5VZ72 239 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 RFX6Q8HWS3 928 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 ZBED8Q8IZ13 594 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 TSC22D3Q99576 134 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.86□□□□□ -0.03
COL6A1-201ENST00000361866 RPS6KA4O75676 772 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 SAT1P21673 171 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 SCP2P22307 547 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 LMNB2Q03252 620 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 GPS1Q13098 491 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 BIRC2Q13490 618 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 RCSD1Q6JBY9 416 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 DNAJC24Q6P3W2 148 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 LONP2Q86WA8 852 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 ATG4AQ8WYN0 398 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 KLF6Q99612 283 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-201ENST00000361866 SUCLA2Q9P2R7 463 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-201ENST00000361866 SCOCQ9UIL1 159 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 SIK3Q9Y2K2 1263 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 ARL2BPQ9Y2Y0 163 aa14.86□□□□□ -0.03
COL6A1-201ENST00000361866 FOXN3O00409 490 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-201ENST00000361866 CDC25CP30307 473 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 PSMC6P62333 389 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 TMEM270Q6UE05 265 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 ZFP69BQ9UJL9 534 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 MAGED2Q9UNF1 606 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-201ENST00000361866 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-201ENST00000361866 DAGLAQ9Y4D2 1042 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 TACC3Q9Y6A5 838 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 ABCB11O95342 1321 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 PHF2O75151 1096 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 SKIP12755 728 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 MTERF2Q49AM1 385 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.85□□□□□ -0.03
COL6A1-201ENST00000361866 FAM213AQ9BRX8 229 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 MRPL47Q9HD33 250 aaKnown RBP14.85□□□□□ -0.03
COL6A1-201ENST00000361866 KITP10721 976 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 TAL1P17542 331 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-201ENST00000361866 IFI35P80217 286 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-201ENST00000361866 DNAJC3Q13217 504 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 KRT81Q14533 505 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 ANKMY2Q8IV38 441 aa14.85□□□□□ -0.03
COL6A1-201ENST00000361866 SYN2Q92777 582 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-201ENST00000361866 IPO5O00410 1097 aaKnown RBP14.84□□□□□ -0.03
COL6A1-201ENST00000361866 ZBED4O75132 1171 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 EYA4O95677 639 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 MYBL1P10243 752 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 MAPK7Q13164 816 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 MAP7D1Q3KQU3 841 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 CENPUQ71F23 418 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.84□□□□□ -0.03
COL6A1-201ENST00000361866 PPARGC1AQ9UBK2 798 aaKnown RBP14.84□□□□□ -0.03
COL6A1-201ENST00000361866 SIGLEC1Q9BZZ2 1709 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 PRELPP51888 382 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 TFAMQ00059 246 aaKnown RBP14.84□□□□□ -0.03
COL6A1-201ENST00000361866 C16orf86Q6ZW13 317 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 APTXQ7Z2E3 356 aaKnown RBP14.84□□□□□ -0.03
COL6A1-201ENST00000361866 ZNF354CQ86Y25 554 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms