RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 RIMS1Q86UR5 1692 aaKnown RBP19.83■□□□□ 0.76
CLIP2-202ENST00000361545 SRGAP2O75044 1071 aa19.83■□□□□ 0.76
CLIP2-202ENST00000361545 TOM1L1O75674 476 aa19.83■□□□□ 0.76
CLIP2-202ENST00000361545 NDUFAF2Q8N183 169 aa19.83■□□□□ 0.76
CLIP2-202ENST00000361545 NEMP1O14524 444 aa19.83■□□□□ 0.76
CLIP2-202ENST00000361545 TSNAXIP1Q2TAA8 658 aa19.83■□□□□ 0.76
CLIP2-202ENST00000361545 REEP2Q9BRK0 252 aa19.83■□□□□ 0.76
CLIP2-202ENST00000361545 FSD1LQ9BXM9 530 aa19.83■□□□□ 0.76
CLIP2-202ENST00000361545 AGAP1Q9UPQ3 857 aa19.83■□□□□ 0.76
CLIP2-202ENST00000361545 NFIAQ12857 509 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 ZNF211Q13398 564 aaPredicted RBP19.82■□□□□ 0.76
CLIP2-202ENST00000361545 KRT33BQ14525 404 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 GLYCTKQ8IVS8 523 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 SCYL3Q8IZE3 742 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 TAF6LQ9Y6J9 622 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 PIK3R2O00459 728 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 KRT3P12035 628 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 SPON2Q9BUD6 331 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 KATNAL1Q9BW62 490 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 WDR91A4D1P6 747 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 LCP1P13796 627 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 PRKCEQ02156 737 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 HSPBP1Q9NZL4 362 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 BAG5Q9UL15 447 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 CEP170BQ9Y4F5 1589 aaPredicted RBP19.82■□□□□ 0.76
CLIP2-202ENST00000361545 PFASO15067 1338 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 TTC26A0AVF1 554 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 SART1O43290 800 aaKnown RBP19.82■□□□□ 0.76
CLIP2-202ENST00000361545 MXD4Q14582 209 aaPredicted RBP19.82■□□□□ 0.76
CLIP2-202ENST00000361545 SNX24Q9Y343 169 aa19.82■□□□□ 0.76
CLIP2-202ENST00000361545 KCNJ6P48051 423 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 STX1BP61266 288 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 LMNTD2Q8IXW0 634 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 LRRC71Q8N4P6 559 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 CFAP61Q8NHU2 1237 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 SNX9Q9Y5X1 595 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 MIF4GDA9UHW6 222 aaKnown RBP19.81■□□□□ 0.76
CLIP2-202ENST00000361545 BAG2O95816 211 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 EMC2Q15006 297 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 GNASQ5JWF2 1037 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 SARM1Q6SZW1 724 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 NUDT12Q9BQG2 462 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 TACO1Q9BSH4 297 aaKnown RBP19.81■□□□□ 0.76
CLIP2-202ENST00000361545 ZDHHC9Q9Y397 364 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 GOLGA8MH3BSY2 632 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 RASGRF2O14827 1237 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 METTL16Q86W50 562 aaKnown RBP19.81■□□□□ 0.76
CLIP2-202ENST00000361545 MTFR1LQ9H019 292 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 PDXKO00764 312 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 PLS3P13797 630 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 NFKBIAP25963 317 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 ACCSLQ4AC99 568 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 ACER1Q8TDN7 264 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 RAB3IPQ96QF0 476 aaPredicted RBP19.81■□□□□ 0.76
CLIP2-202ENST00000361545 CCSER1Q9C0I3 900 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 FRMPD1Q5SYB0 1578 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 KPNA2P52292 529 aaKnown RBP19.81■□□□□ 0.76
CLIP2-202ENST00000361545 VEPH1Q14D04 833 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 BTBD8Q5XKL5 378 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 RNF10Q8N5U6 811 aaKnown RBP19.81■□□□□ 0.76
CLIP2-202ENST00000361545 CDC26Q8NHZ8 85 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 TAAR1Q96RJ0 339 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 SAYSD1Q9NPB0 183 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 TTC7AQ9ULT0 858 aaPredicted RBP19.81■□□□□ 0.76
CLIP2-202ENST00000361545 NFU1Q9UMS0 254 aa19.81■□□□□ 0.76
CLIP2-202ENST00000361545 PDS5AQ29RF7 1337 aaKnown RBP19.8■□□□□ 0.76
CLIP2-202ENST00000361545 RPS6P62753 249 aaKnown RBP19.8■□□□□ 0.76
CLIP2-202ENST00000361545 IFT43Q96FT9 208 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 MXRA8Q9BRK3 442 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 DHX35Q9H5Z1 703 aaKnown RBP19.8■□□□□ 0.76
CLIP2-202ENST00000361545 G3BP2Q9UN86 482 aaKnown RBP19.8■□□□□ 0.76
CLIP2-202ENST00000361545 PXDNLA1KZ92 1463 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 COG7P83436 770 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 ZSCAN26Q16670 478 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 TTC30BQ8N4P2 665 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 PARD6BQ9BYG5 372 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 MAP3K20Q9NYL2 800 aaKnown RBP19.8■□□□□ 0.76
CLIP2-202ENST00000361545 DIP2BQ9P265 1576 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 CYP26A1O43174 497 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 AP3M2P53677 418 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 IER5Q5VY09 327 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 ZMYND12Q9H0C1 365 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 SYNGAP1Q96PV0 1343 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 CHST13Q8NET6 341 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 SCFD2Q8WU76 684 aa19.8■□□□□ 0.76
CLIP2-202ENST00000361545 CASQ2O14958 399 aaPredicted RBP19.79■□□□□ 0.76
CLIP2-202ENST00000361545 GRIK1P39086 918 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 DBN1Q16643 649 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 KYAT1Q16773 422 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 TXNRD3Q86VQ6 643 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 TTC39CQ8N584 583 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 MEGF6O75095 1541 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 NNMTP40261 264 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 EFHC2Q5JST6 749 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 KIAA1755Q5JYT7 1200 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 FRMD5Q7Z6J6 570 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 TNIP3Q96KP6 325 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 BPIFA3Q9BQP9 254 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 TBX3O15119 743 aa19.79■□□□□ 0.76
CLIP2-202ENST00000361545 RPS6KA5O75582 802 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms