RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 USTQ9Y2C2 406 aa16.84■□□□□ 0.29
GDPD3-201ENST00000360688 H0Y858 1186 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 DKC1O60832 514 aaKnown RBP eCLIP16.83■□□□□ 0.28
GDPD3-201ENST00000360688 DDHD2O94830 711 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 P4HBP07237 508 aaKnown RBP16.83■□□□□ 0.28
GDPD3-201ENST00000360688 NUBP1P53384 320 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 UBXN11Q5T124 520 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 PPP4R3AQ6IN85 833 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 SRGAP1Q7Z6B7 1085 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 CABP7Q86V35 215 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 PPFIBP1Q86W92 1011 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 PLCD3Q8N3E9 789 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 URGCPQ8TCY9 931 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 PRPF31Q8WWY3 499 aaKnown RBP16.83■□□□□ 0.28
GDPD3-201ENST00000360688 ATOH1Q92858 354 aaPredicted RBP16.83■□□□□ 0.28
GDPD3-201ENST00000360688 TMEM143Q96AN5 459 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 CEP170P1Q96L14 293 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 FAM20AQ96MK3 541 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 PHF20Q9BVI0 1012 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 SLKQ9H2G2 1235 aaPredicted RBP16.83■□□□□ 0.28
GDPD3-201ENST00000360688 RSAD1Q9HA92 442 aa16.83■□□□□ 0.28
GDPD3-201ENST00000360688 CCDC194A0A1B0GVG4 234 aa16.82■□□□□ 0.28
GDPD3-201ENST00000360688 GALR2O43603 387 aaPredicted RBP16.82■□□□□ 0.28
GDPD3-201ENST00000360688 ST18O60284 1047 aa16.82■□□□□ 0.28
GDPD3-201ENST00000360688 SRGAP2CP0DJJ0 459 aa16.82■□□□□ 0.28
GDPD3-201ENST00000360688 HOXA11P31270 313 aaPredicted RBP16.82■□□□□ 0.28
GDPD3-201ENST00000360688 RFC5P40937 340 aa16.82■□□□□ 0.28
GDPD3-201ENST00000360688 LAMTOR4Q0VGL1 99 aa16.82■□□□□ 0.28
GDPD3-201ENST00000360688 NEK8Q86SG6 692 aa16.82■□□□□ 0.28
GDPD3-201ENST00000360688 GPR149Q86SP6 731 aa16.82■□□□□ 0.28
GDPD3-201ENST00000360688 EXOC8Q8IYI6 725 aa16.82■□□□□ 0.28
GDPD3-201ENST00000360688 PSPC1Q8WXF1 523 aaKnown RBP16.82■□□□□ 0.28
GDPD3-201ENST00000360688 PPME1Q9Y570 386 aa16.82■□□□□ 0.28
GDPD3-201ENST00000360688 CNTNAP2Q9UHC6 1331 aa16.82■□□□□ 0.28
GDPD3-201ENST00000360688 TDRD15B5MCY1 1934 aaKnown RBP16.81■□□□□ 0.28
GDPD3-201ENST00000360688 LILRB3O75022 631 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 SSBP05455 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
GDPD3-201ENST00000360688 CNPP09543 421 aaKnown RBP16.81■□□□□ 0.28
GDPD3-201ENST00000360688 GCFC2P16383 781 aaKnown RBP16.81■□□□□ 0.28
GDPD3-201ENST00000360688 EPHA7Q15375 998 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 C4orf19Q8IY42 314 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 TMEM105Q8N8V8 129 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 HAS1Q92839 578 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 KLHL5Q96PQ7 755 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 LXNQ9BS40 222 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 TMEM175Q9BSA9 504 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 EMILIN2Q9BXX0 1053 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 SFXN1Q9H9B4 322 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 BMP2KQ9NSY1 1161 aaPredicted RBP16.81■□□□□ 0.28
GDPD3-201ENST00000360688 KANSL3Q9P2N6 904 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 STK39Q9UEW8 545 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 FAN1Q9Y2M0 1017 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 PTPRZ1P23471 2315 aaPredicted RBP16.81■□□□□ 0.28
GDPD3-201ENST00000360688 WDR87Q6ZQQ6 2873 aa16.81■□□□□ 0.28
GDPD3-201ENST00000360688 NRP1O14786 923 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 TBX3O15119 743 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 CCNT1O60563 726 aaKnown RBP16.8■□□□□ 0.28
GDPD3-201ENST00000360688 GFRA3O60609 400 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 POMCP01189 267 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 ALDH2P05091 517 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 NCLP19338 710 aaKnown RBP16.8■□□□□ 0.28
GDPD3-201ENST00000360688 KLRC2P26717 231 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 YWHABP31946 246 aaKnown RBP16.8■□□□□ 0.28
GDPD3-201ENST00000360688 CLCN4P51793 760 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 SCRN1Q12765 414 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 FERMT3Q86UX7 667 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 OXER1Q8TDS5 423 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 FAM193BQ96PV7 902 aaPredicted RBP16.8■□□□□ 0.28
GDPD3-201ENST00000360688 GJB4Q9NTQ9 266 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 PDRG1Q9NUG6 133 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 RGL1Q9NZL6 768 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 RIF1Q5UIP0 2472 aaKnown RBP16.8■□□□□ 0.28
GDPD3-201ENST00000360688 DMDP11532 3685 aa16.8■□□□□ 0.28
GDPD3-201ENST00000360688 ZBTB39O15060 712 aa16.79■□□□□ 0.28
GDPD3-201ENST00000360688 ASAP2O43150 1006 aa16.79■□□□□ 0.28
GDPD3-201ENST00000360688 GAS2O43903 313 aaKnown RBP16.79■□□□□ 0.28
GDPD3-201ENST00000360688 SPIRE1Q08AE8 756 aa16.79■□□□□ 0.28
GDPD3-201ENST00000360688 EMC2Q15006 297 aa16.79■□□□□ 0.28
GDPD3-201ENST00000360688 NCAPH2Q6IBW4 605 aa16.79■□□□□ 0.28
GDPD3-201ENST00000360688 PIK3AP1Q6ZUJ8 805 aa16.79■□□□□ 0.28
GDPD3-201ENST00000360688 SMG8Q8ND04 991 aaKnown RBP16.79■□□□□ 0.28
GDPD3-201ENST00000360688 TCP11Q8WWU5 503 aa16.79■□□□□ 0.28
GDPD3-201ENST00000360688 ACSF2Q96CM8 615 aaPredicted RBP16.79■□□□□ 0.28
GDPD3-201ENST00000360688 DYDC2Q96IM9 177 aa16.79■□□□□ 0.28
GDPD3-201ENST00000360688 MRPL17Q9NRX2 175 aaKnown RBP16.79■□□□□ 0.28
GDPD3-201ENST00000360688 PPP4R2Q9NY27 417 aa16.79■□□□□ 0.28
GDPD3-201ENST00000360688 SPTBN4Q9H254 2564 aa16.79■□□□□ 0.28
GDPD3-201ENST00000360688 STK36Q9NRP7 1315 aa16.79■□□□□ 0.28
GDPD3-201ENST00000360688 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
GDPD3-201ENST00000360688 DTNBO60941 627 aa16.78■□□□□ 0.28
GDPD3-201ENST00000360688 CDKL5O76039 1030 aa16.78■□□□□ 0.28
GDPD3-201ENST00000360688 SOD2P04179 222 aa16.78■□□□□ 0.28
GDPD3-201ENST00000360688 CYP4A11Q02928 519 aa16.78■□□□□ 0.28
GDPD3-201ENST00000360688 CTTNQ14247 550 aaKnown RBP16.78■□□□□ 0.28
GDPD3-201ENST00000360688 XKR9Q5GH70 373 aa16.78■□□□□ 0.28
GDPD3-201ENST00000360688 EARS2Q5JPH6 523 aaKnown RBP16.78■□□□□ 0.28
GDPD3-201ENST00000360688 ASTLQ6HA08 431 aaPredicted RBP16.78■□□□□ 0.28
GDPD3-201ENST00000360688 CCDC149Q6ZUS6 474 aa16.78■□□□□ 0.28
GDPD3-201ENST00000360688 OTUD6AQ7L8S5 288 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms