RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 PRMT7Q9NVM4 692 aaPredicted RBP7.08□□□□□ -1.28
SUDS3-201ENST00000360286 LARSQ9P2J5 1176 aaKnown RBP7.08□□□□□ -1.28
SUDS3-201ENST00000360286 USP25Q9UHP3 1055 aa7.08□□□□□ -1.28
SUDS3-201ENST00000360286 SLC4A7Q9Y6M7 1214 aa7.08□□□□□ -1.28
SUDS3-201ENST00000360286 PTPRSQ13332 1948 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 TTC3P53804 2025 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 FRMD3A2A2Y4 597 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 DENND3A2RUS2 1198 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 K7ENM7 598 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 ACKR2O00590 384 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 GTPBP6O43824 516 aaPredicted RBP7.07□□□□□ -1.28
SUDS3-201ENST00000360286 BAIAP3O94812 1187 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 ERLIN2O94905 339 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 MYBP10242 640 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 MAPTP10636 758 aaKnown RBP7.07□□□□□ -1.28
SUDS3-201ENST00000360286 ARF4P18085 180 aaPredicted RBP7.07□□□□□ -1.28
SUDS3-201ENST00000360286 SFPQP23246 707 aaKnown RBP eCLIP7.07□□□□□ -1.28
SUDS3-201ENST00000360286 KCNJ6P48051 423 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 CASP5P51878 434 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 EFNA5P52803 228 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 RABGGTBP53611 331 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 SMTNP53814 917 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 FAM189BP81408 668 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 DPYDQ12882 1025 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 COASYQ13057 564 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 PNOCQ13519 176 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 PRPF4BQ13523 1007 aaKnown RBP7.07□□□□□ -1.28
SUDS3-201ENST00000360286 MAPK6Q16659 721 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 FAM187BQ17R55 369 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 KMT5BQ4FZB7 885 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 UBXN11Q5T124 520 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 EEF1DP3Q658K8 133 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 CNNM4Q6P4Q7 775 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 UNC13DQ70J99 1090 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 ZNF720Q7Z2F6 126 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 HAUS6Q7Z4H7 955 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 FAM178BQ8IXR5 827 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 CCDC65Q8IXS2 484 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 MYOCDQ8IZQ8 938 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 TOP1MTQ969P6 601 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 ZBTB45Q96K62 511 aaPredicted RBP7.07□□□□□ -1.28
SUDS3-201ENST00000360286 GBP4Q96PP9 640 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 TARS2Q9BW92 718 aaKnown RBP7.07□□□□□ -1.28
SUDS3-201ENST00000360286 FTHL17Q9BXU8 183 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 EIF2AQ9BY44 585 aaKnown RBP7.07□□□□□ -1.28
SUDS3-201ENST00000360286 C2orf40Q9H1Z8 148 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 TSPYL2Q9H2G4 693 aaPredicted RBP7.07□□□□□ -1.28
SUDS3-201ENST00000360286 IKZF4Q9H2S9 585 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 MRPL44Q9H9J2 332 aaKnown RBP7.07□□□□□ -1.28
SUDS3-201ENST00000360286 MAGEF1Q9HAY2 307 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 CHST12Q9NRB3 414 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 AGPAT5Q9NUQ2 364 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 DACT1Q9NYF0 836 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 ARHGAP28Q9P2N2 729 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 KCNG1Q9UIX4 513 aa7.07□□□□□ -1.28
SUDS3-201ENST00000360286 PIN4Q9Y237 131 aaKnown RBP7.07□□□□□ -1.28
SUDS3-201ENST00000360286 LAMA2P24043 3122 aaKnown RBP7.06□□□□□ -1.28
SUDS3-201ENST00000360286 RANBP2P49792 3224 aaKnown RBP7.06□□□□□ -1.28
SUDS3-201ENST00000360286 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.06□□□□□ -1.28
SUDS3-201ENST00000360286 A0A1B0GUA9 196 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.06□□□□□ -1.28
SUDS3-201ENST00000360286 PVALEFA0A1B0GWK0 134 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 C9IYK1 514 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 EFCAB14O75071 495 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 PRPF6O94906 941 aaKnown RBP7.06□□□□□ -1.28
SUDS3-201ENST00000360286 GCNT3O95395 438 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 NPTXRO95502 500 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 AMHP03971 560 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 RPN1P04843 607 aaKnown RBP7.06□□□□□ -1.28
SUDS3-201ENST00000360286 MYOGP15173 224 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 ATP2A2P16615 1042 aaKnown RBP7.06□□□□□ -1.28
SUDS3-201ENST00000360286 GAP43P17677 238 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 AXLP30530 894 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 PBX2P40425 430 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 SARSP49591 514 aaKnown RBP7.06□□□□□ -1.28
SUDS3-201ENST00000360286 GATMP50440 423 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 GTF2BQ00403 316 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 NCBP1Q09161 790 aaKnown RBP7.06□□□□□ -1.28
SUDS3-201ENST00000360286 KCNA1Q09470 495 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 POSTNQ15063 836 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 TMEM132AQ24JP5 1023 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 TWF2Q6IBS0 349 aaKnown RBP7.06□□□□□ -1.28
SUDS3-201ENST00000360286 KANK3Q6NY19 840 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 SLC24A5Q71RS6 500 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 ZBTB33Q86T24 672 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 ECHDC2Q86YB7 292 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 CRIPAKQ8N1N5 446 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 PHOSPHO2Q8TCD6 241 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 GPT2Q8TD30 523 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 LPPQ93052 612 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 TIGD1Q96MW7 591 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 ACO2Q99798 780 aaKnown RBP7.06□□□□□ -1.28
SUDS3-201ENST00000360286 STRA6Q9BX79 667 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 RNF39Q9H2S5 420 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 PDZD7Q9H5P4 517 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 SLC39A2Q9NP94 309 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 TBX20Q9UMR3 447 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 PCDHB7Q9Y5E2 793 aa7.06□□□□□ -1.28
SUDS3-201ENST00000360286 TRIOBPQ9H2D6 2365 aa7.05□□□□□ -1.28
SUDS3-201ENST00000360286 PHLPP2Q6ZVD8 1323 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms