RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ZNF302Q9NR11 478 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 ABCF3Q9NUQ8 709 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 WARS2Q9UGM6 360 aaKnown RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 TBC1D4O60343 1298 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 CTTNQ14247 550 aaKnown RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 SNRNP48Q6IEG0 339 aaKnown RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 ZHX2Q9Y6X8 837 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 LRRIQ3A6PVS8 624 aaPredicted RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 GSPT1P15170 499 aaKnown RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 BFARQ9NZS9 450 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 P3H1Q32P28 736 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 BTBD8Q5XKL5 378 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 GRAMD4Q6IC98 578 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 OLFM3Q96PB7 478 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 WDR91A4D1P6 747 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 FAM107AO95990 144 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 ALDH1A1P00352 501 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 UGP2Q16851 508 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 TBC1D1Q86TI0 1168 aaPredicted RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 ZFP42Q96MM3 310 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 PCIF1Q9H4Z3 704 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 IFNAR2P48551 515 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 SKOR1P84550 965 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 ERFEQ4G0M1 354 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 EFHC2Q5JST6 749 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 HABP4Q5JVS0 413 aaKnown RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 TAS2R42Q7RTR8 314 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 ZNF564Q8TBZ8 553 aaPredicted RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 ZBTB41Q5SVQ8 909 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 VSTM4Q8IW00 320 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 ZNF526Q8TF50 670 aaPredicted RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 GOLPH3LQ9H4A5 285 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 SLCO1A2P46721 670 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 ANO4Q32M45 955 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 LRRC24Q50LG9 513 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 PRUNE1Q86TP1 453 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 ACAD9Q9H845 621 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 SLC4A7Q9Y6M7 1214 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 KIF23Q02241 960 aaPredicted RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 GIMAP4Q9NUV9 329 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 STOML1Q9UBI4 398 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 HDAC6Q9UBN7 1215 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 CAPZA2P47755 286 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 PSMC5P62195 406 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 SYDE1Q6ZW31 735 aaPredicted RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 IL17REQ8NFR9 667 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 MAD2L2Q9UI95 211 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 PSMD3O43242 534 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 CDH2P19022 906 aaPredicted RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 HADHAP40939 763 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 FASTKD1Q53R41 847 aaKnown RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 ALKBH5Q6P6C2 394 aaKnown RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 TRIML2Q8N7C3 387 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 ZSWIM5Q9P217 1185 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 CYBBP04839 570 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 RPLP2P05387 115 aaKnown RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 HLA-DPA1P20036 260 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 ZNF235Q14590 738 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 KNOP1Q1ED39 458 aaKnown RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 PPP6R3Q5H9R7 873 aaPredicted RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 GTSE1Q9NYZ3 720 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 SLC9A2Q9UBY0 812 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 ASB14A6NK59 587 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 PPARGC1AQ9UBK2 798 aaKnown RBP10.26□□□□□ -0.77
CUX1-203ENST00000360264 UTYO14607 1347 aa10.26□□□□□ -0.77
CUX1-203ENST00000360264 SMAPO00193 183 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 KCNJ6P48051 423 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 TMED1Q13445 227 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 TMEM106CQ9BVX2 250 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 MAGED2Q9UNF1 606 aaPredicted RBP10.25□□□□□ -0.77
CUX1-203ENST00000360264 QARSP47897 775 aaKnown RBP10.25□□□□□ -0.77
CUX1-203ENST00000360264 SNF8Q96H20 258 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 SNX5Q9Y5X3 404 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 RALBP11234 206 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 KCNA2P16389 499 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 NR5A1Q13285 461 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 LBHD1Q9BQE6 289 aaPredicted RBP10.25□□□□□ -0.77
CUX1-203ENST00000360264 THEMIS2Q5TEJ8 643 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 ATP11CQ8NB49 1132 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 SEC16AO15027 2179 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 PVALEFA0A1B0GWK0 134 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 CTIFO43310 598 aaKnown RBP10.25□□□□□ -0.77
CUX1-203ENST00000360264 CXCR5P32302 372 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 CLCN6P51797 869 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 KRT31Q15323 416 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 C17orf53Q8N3J3 647 aaPredicted RBP10.25□□□□□ -0.77
CUX1-203ENST00000360264 ICA1LQ8NDH6 482 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 HEY1Q9Y5J3 304 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 VPS9D1Q9Y2B5 631 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 GDAQ9Y2T3 454 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 ZNF568Q3ZCX4 644 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 TMEM259Q4ZIN3 620 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 TJAP1Q5JTD0 557 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 ADAMTS1Q9UHI8 967 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 A0A0G2JND7 137 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 RASSF3Q86WH2 238 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 TUFT1Q9NNX1 390 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 UTP6Q9NYH9 597 aaKnown RBP10.25□□□□□ -0.77
CUX1-203ENST00000360264 ROR1Q01973 937 aa10.25□□□□□ -0.77
CUX1-203ENST00000360264 JPH1Q9HDC5 661 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms