RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 INO80BQ9C086 356 aaPredicted RBP23.97■■□□□ 1.43
HOXA4-201ENST00000360046 IFNKQ9P0W0 207 aa23.97■■□□□ 1.43
HOXA4-201ENST00000360046 CGNQ9P2M7 1197 aaKnown RBP23.97■■□□□ 1.43
HOXA4-201ENST00000360046 LIG4P49917 911 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 CYP2J2P51589 502 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 MAPK6Q16659 721 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 SESTD1Q86VW0 696 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 ZC3H3Q8IXZ2 948 aaKnown RBP23.96■■□□□ 1.43
HOXA4-201ENST00000360046 CCDC113Q9H0I3 377 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 IFT122Q9HBG6 1241 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 GINS2Q9Y248 185 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 ANKRD63C9JTQ0 380 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 PRKCBP05771 671 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 SNRPFP62306 86 aaKnown RBP23.96■■□□□ 1.43
HOXA4-201ENST00000360046 POU5F1BQ06416 359 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 KRT31Q15323 416 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 NFIL3Q16649 462 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 KIZQ2M2Z5 673 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 CCDC40Q4G0X9 1142 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 CEP135Q66GS9 1140 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 ARMCX5Q6P1M9 558 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 TAF2Q6P1X5 1199 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 ZNF410Q86VK4 478 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 TMEM106CQ9BVX2 250 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 NFKBIZQ9BYH8 718 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 CRISPLD2Q9H0B8 497 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 USP20Q9Y2K6 914 aa23.96■■□□□ 1.43
HOXA4-201ENST00000360046 MTIF2P46199 727 aaKnown RBP23.95■■□□□ 1.42
HOXA4-201ENST00000360046 ZNF75DP51815 510 aa23.95■■□□□ 1.42
HOXA4-201ENST00000360046 UBASH3AP57075 661 aa23.95■■□□□ 1.42
HOXA4-201ENST00000360046 CDC42EP1Q00587 391 aa23.95■■□□□ 1.42
HOXA4-201ENST00000360046 FILIP1Q7Z7B0 1213 aa23.95■■□□□ 1.42
HOXA4-201ENST00000360046 CBWD1Q9BRT8 395 aa23.95■■□□□ 1.42
HOXA4-201ENST00000360046 XPO4Q9C0E2 1151 aaKnown RBP23.95■■□□□ 1.42
HOXA4-201ENST00000360046 PCIF1Q9H4Z3 704 aa23.95■■□□□ 1.42
HOXA4-201ENST00000360046 TAB2Q9NYJ8 693 aa23.95■■□□□ 1.42
HOXA4-201ENST00000360046 LIMA1Q9UHB6 759 aaKnown RBP23.95■■□□□ 1.42
HOXA4-201ENST00000360046 A0A0U1RQG5 324 aaPredicted RBP23.94■■□□□ 1.42
HOXA4-201ENST00000360046 MBTD1Q05BQ5 628 aa23.94■■□□□ 1.42
HOXA4-201ENST00000360046 PTGISQ16647 500 aa23.94■■□□□ 1.42
HOXA4-201ENST00000360046 CTAGE1Q96RT6 745 aa23.94■■□□□ 1.42
HOXA4-201ENST00000360046 MINDY3Q9H8M7 445 aa23.94■■□□□ 1.42
HOXA4-201ENST00000360046 CBFA2T2O43439 604 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 GNA14O95837 355 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 EDN1P05305 212 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 SLC39A4Q6P5W5 647 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 TARS2Q9BW92 718 aaKnown RBP23.93■■□□□ 1.42
HOXA4-201ENST00000360046 MRPL4Q9BYD3 311 aaKnown RBP23.93■■□□□ 1.42
HOXA4-201ENST00000360046 SENP6Q9GZR1 1112 aaPredicted RBP23.93■■□□□ 1.42
HOXA4-201ENST00000360046 NOD1Q9Y239 953 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 EXOC3O60645 756 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 CSDE1O75534 798 aaKnown RBP23.93■■□□□ 1.42
HOXA4-201ENST00000360046 PRKCSHP14314 528 aaPredicted RBP23.93■■□□□ 1.42
HOXA4-201ENST00000360046 GJA8P48165 433 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 CASP4P49662 377 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 PTPN11Q06124 597 aaPredicted RBP23.93■■□□□ 1.42
HOXA4-201ENST00000360046 TMEM132AQ24JP5 1023 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 SERINC5Q86VE9 423 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 IFNLR1Q8IU57 520 aaPredicted RBP23.93■■□□□ 1.42
HOXA4-201ENST00000360046 SLC9A9Q8IVB4 645 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 C12orf56Q8IXR9 622 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 NME8Q8N427 588 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 POMGNT1Q8WZA1 660 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 TUBGCP2Q9BSJ2 902 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 VPS16Q9H269 839 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 ADAMTS10Q9H324 1103 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 HSPBP1Q9NZL4 362 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 FRMD4BQ9Y2L6 1034 aa23.93■■□□□ 1.42
HOXA4-201ENST00000360046 SLC16A3O15427 465 aaKnown RBP23.92■■□□□ 1.42
HOXA4-201ENST00000360046 GPR32O75388 356 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 AKAP3O75969 853 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 PIGRP01833 764 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 TPM3P06753 285 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 TPM2P07951 284 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 EPB41P11171 864 aaKnown RBP23.92■■□□□ 1.42
HOXA4-201ENST00000360046 ADSSP30520 456 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 MATR3P43243 847 aaKnown RBP eCLIP23.92■■□□□ 1.42
HOXA4-201ENST00000360046 PRPF4BQ13523 1007 aaKnown RBP23.92■■□□□ 1.42
HOXA4-201ENST00000360046 MYBPC2Q14324 1141 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 FILIP1LQ4L180 1135 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 APTXQ7Z2E3 356 aaKnown RBP23.92■■□□□ 1.42
HOXA4-201ENST00000360046 RSPH3Q86UC2 560 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 NAP1L5Q96NT1 182 aaPredicted RBP23.92■■□□□ 1.42
HOXA4-201ENST00000360046 OSMRQ99650 979 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 GCOM2Q9BZD3 368 aaPredicted RBP23.92■■□□□ 1.42
HOXA4-201ENST00000360046 FZD8Q9H461 694 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 PRMT7Q9NVM4 692 aaPredicted RBP23.92■■□□□ 1.42
HOXA4-201ENST00000360046 DMAC2Q9NW81 257 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 ANKFY1Q9P2R3 1169 aa23.92■■□□□ 1.42
HOXA4-201ENST00000360046 PES1O00541 588 aaKnown RBP23.91■■□□□ 1.42
HOXA4-201ENST00000360046 ACKR2O00590 384 aa23.91■■□□□ 1.42
HOXA4-201ENST00000360046 COPB1P53618 953 aaKnown RBP23.91■■□□□ 1.42
HOXA4-201ENST00000360046 SRGAP1Q7Z6B7 1085 aa23.91■■□□□ 1.42
HOXA4-201ENST00000360046 XXYLT1Q8NBI6 393 aa23.91■■□□□ 1.42
HOXA4-201ENST00000360046 TRMT13Q9NUP7 481 aaKnown RBP23.91■■□□□ 1.42
HOXA4-201ENST00000360046 TTLL13PA6NNM8 815 aa23.9■■□□□ 1.42
HOXA4-201ENST00000360046 ARVCFO00192 962 aa23.9■■□□□ 1.42
HOXA4-201ENST00000360046 N4BP3O15049 544 aa23.9■■□□□ 1.42
HOXA4-201ENST00000360046 IQCF3P0C7M6 154 aa23.9■■□□□ 1.42
HOXA4-201ENST00000360046 PSMC2P35998 433 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms