RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 WASHC5Q12768 1159 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 ARHGAP15Q53QZ3 475 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 HEATR6Q6AI08 1181 aaKnown RBP13.82□□□□□ -0.2
NLRC3-202ENST00000359128 CCDC197Q8NCU1 140 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 MAML1Q92585 1016 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 SEPT5Q99719 369 aaPredicted RBP13.82□□□□□ -0.2
NLRC3-202ENST00000359128 CENPKQ9BS16 269 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 EHD2Q9NZN4 543 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 ZNF70Q9UC06 446 aaPredicted RBP13.82□□□□□ -0.2
NLRC3-202ENST00000359128 CDC23Q9UJX2 597 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 STK36Q9NRP7 1315 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 POTEIP0CG38 1075 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 KRT17Q04695 432 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 ZKSCAN8Q15776 578 aaPredicted RBP13.82□□□□□ -0.2
NLRC3-202ENST00000359128 KNOP1Q1ED39 458 aaKnown RBP13.82□□□□□ -0.2
NLRC3-202ENST00000359128 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 POTEEQ6S8J3 1075 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 PROM2Q8N271 834 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 GPRC5AQ8NFJ5 357 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 SERPINI1Q99574 410 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 CEP72Q9P209 647 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 PI4K2BG5E9Z4 385 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 PSMD14O00487 310 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 CFLARO15519 480 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 OCM2P0CE71 109 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 OCMP0CE72 109 aaPredicted RBP13.82□□□□□ -0.2
NLRC3-202ENST00000359128 SLCO1A2P46721 670 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 DHX9Q08211 1270 aaKnown RBP13.82□□□□□ -0.2
NLRC3-202ENST00000359128 TRIM59Q8IWR1 403 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 ENOX1Q8TC92 643 aaKnown RBP13.82□□□□□ -0.2
NLRC3-202ENST00000359128 LPAR1Q92633 364 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 BARHL2Q9NY43 387 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 GTSE1Q9NYZ3 720 aa13.82□□□□□ -0.2
NLRC3-202ENST00000359128 STXBP3O00186 592 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 MYBL1P10243 752 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 ITGA4P13612 1032 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 DDX5P17844 614 aaKnown RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 DUOXA2Q1HG44 320 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 RESP18Q5W5W9 173 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 ENAHQ8N8S7 591 aaPredicted RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 SAYSD1Q9NPB0 183 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 AAASQ9NRG9 546 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 CAPN7Q9Y6W3 813 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 CCDC151A5D8V7 595 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 PRAMEP78395 509 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 C11orf57Q6ZUT1 292 aaPredicted RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 SCYL3Q8IZE3 742 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 GPT2Q8TD30 523 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 PLEKHA5Q9HAU0 1116 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 PFASO15067 1338 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 TUBB6Q9BUF5 446 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 INTS2Q9H0H0 1204 aaKnown RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 DDX56Q9NY93 547 aaKnown RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 CPSF2Q9P2I0 782 aaKnown RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 SNAP23O00161 211 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 FAM102AQ5T9C2 384 aaPredicted RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 ANKRD40Q6AI12 368 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 PCSK1NQ9UHG2 260 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 SLC25A27O95847 323 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 AKR1B1P15121 316 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 GMPSP49915 693 aaPredicted RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 VCPP55072 806 aaKnown RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 ETF1P62495 437 aaKnown RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 ALKBH5Q6P6C2 394 aaKnown RBP13.81□□□□□ -0.2
NLRC3-202ENST00000359128 NUP85Q9BW27 656 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 ZMYND12Q9H0C1 365 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 MED4Q9NPJ6 270 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 AXIN2Q9Y2T1 843 aa13.81□□□□□ -0.2
NLRC3-202ENST00000359128 ROR1Q01973 937 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 STYK1Q6J9G0 422 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 WHAMMQ8TF30 809 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 RAPGEF5Q92565 580 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 C11orf70Q9BRQ4 267 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 MYOZ2Q9NPC6 264 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 PPP1R9AQ9ULJ8 1098 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 KPNA7A9QM74 516 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 ZFXP17010 805 aaPredicted RBP13.8□□□□□ -0.2
NLRC3-202ENST00000359128 GNL1P36915 607 aaPredicted RBP13.8□□□□□ -0.2
NLRC3-202ENST00000359128 CDKL3Q8IVW4 592 aaPredicted RBP13.8□□□□□ -0.2
NLRC3-202ENST00000359128 DHX35Q9H5Z1 703 aaKnown RBP13.8□□□□□ -0.2
NLRC3-202ENST00000359128 DNAJC17Q9NVM6 304 aaKnown RBP13.8□□□□□ -0.2
NLRC3-202ENST00000359128 A0A087WWV3 80 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 USP11P51784 963 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 CRLF3Q8IUI8 442 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 HEMGNQ9BXL5 484 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 TEX13BQ9BXU2 312 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
NLRC3-202ENST00000359128 L3MBTL1Q9Y468 752 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 GGPS1O95749 300 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 SYF2O95926 243 aaKnown RBP13.8□□□□□ -0.2
NLRC3-202ENST00000359128 COPS2P61201 443 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 CXorf38Q8TB03 319 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 MUC3BQ9H195 1237 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
NLRC3-202ENST00000359128 GTF2A2P52657 109 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 PKP1Q13835 747 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 CASS4Q9NQ75 786 aa13.8□□□□□ -0.2
NLRC3-202ENST00000359128 KRT37O76014 449 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms