RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 OXER1Q8TDS5 423 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 CYP4F11Q9HBI6 524 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 PSMC1P62191 440 aaKnown RBP19.53■□□□□ 0.72
SHANK1-202ENST00000359082 LRRC14Q15048 493 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 CCDC85BQ15834 202 aaPredicted RBP19.53■□□□□ 0.72
SHANK1-202ENST00000359082 HEG1Q9ULI3 1381 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 POTEB3A0JP26 581 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 FAM196BA6NMK8 535 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 POTECB2RU33 542 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 POTEBQ6S5H4 581 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 RTKN2Q8IZC4 609 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 ZNF507Q8TCN5 953 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 SAAL1Q96ER3 474 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 FAM167AQ96KS9 214 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 FAM161BQ96MY7 647 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 LGALS16A8MUM7 142 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 MAGEB5Q9BZ81 275 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 MIF4GDA9UHW6 222 aaKnown RBP19.53■□□□□ 0.72
SHANK1-202ENST00000359082 ERVV-1B6SEH8 477 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 LCP1P13796 627 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 PFKFB3Q16875 520 aaPredicted RBP19.53■□□□□ 0.72
SHANK1-202ENST00000359082 SWSAP1Q6NVH7 229 aa19.53■□□□□ 0.72
SHANK1-202ENST00000359082 KRT14P02533 472 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 SDC4P31431 198 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 CAV1Q03135 178 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 OTULINQ96BN8 352 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 KIAA1586Q9HCI6 787 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 LRRC8EQ6NSJ5 796 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 ASIC4Q96FT7 647 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 ZFYVE19Q96K21 471 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 TRIM45Q9H8W5 580 aaPredicted RBP19.52■□□□□ 0.72
SHANK1-202ENST00000359082 FAM217BQ9NTX9 383 aaPredicted RBP19.52■□□□□ 0.72
SHANK1-202ENST00000359082 LCMT1Q9UIC8 334 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 RNF103-CHMP3A0A140T963 221 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 DONSONQ9NYP3 566 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 ZHX2Q9Y6X8 837 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 SASH1O94885 1247 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 NAALADL2Q58DX5 795 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 KDELC2Q7Z4H8 507 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 BRIP1Q9BX63 1249 aa19.52■□□□□ 0.72
SHANK1-202ENST00000359082 STX18Q9P2W9 335 aaKnown RBP19.52■□□□□ 0.72
SHANK1-202ENST00000359082 PIK3R2O00459 728 aa19.52■□□□□ 0.71
SHANK1-202ENST00000359082 DNAJC6O75061 913 aa19.52■□□□□ 0.71
SHANK1-202ENST00000359082 HNRNPH2P55795 449 aaKnown RBP19.52■□□□□ 0.71
SHANK1-202ENST00000359082 AP2B1P63010 937 aa19.52■□□□□ 0.71
SHANK1-202ENST00000359082 MRPL40Q9NQ50 206 aaKnown RBP19.52■□□□□ 0.71
SHANK1-202ENST00000359082 CACNB2Q08289 660 aaPredicted RBP19.51■□□□□ 0.71
SHANK1-202ENST00000359082 SNF8Q96H20 258 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 EPAS1Q99814 870 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 SLC7A5P2Q9GIP4 190 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 KIF1BO60333 1816 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 MTBPQ96DY7 904 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 MASTLQ96GX5 879 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 FAM96AQ9H5X1 160 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 GABBR1Q9UBS5 961 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 ATP5HO75947 161 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 PPP2R2AP63151 447 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 NECTIN1Q15223 517 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 FASTKD1Q53R41 847 aaKnown RBP19.51■□□□□ 0.71
SHANK1-202ENST00000359082 MCPH1Q8NEM0 835 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 OSBPL9Q96SU4 736 aa19.51■□□□□ 0.71
SHANK1-202ENST00000359082 POTEFA5A3E0 1075 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 MAN1A2O60476 641 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 POTEIP0CG38 1075 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 NNMTP40261 264 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 ARFIP2P53365 341 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 EFHC2Q5JST6 749 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 ANKRD40Q6AI12 368 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 POTEGQ6S5H5 508 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 POTEEQ6S8J3 1075 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 MMP19Q99542 508 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 TMEM47Q9BQJ4 181 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 ASPSCR1Q9BZE9 553 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 DHX35Q9H5Z1 703 aaKnown RBP19.5■□□□□ 0.71
SHANK1-202ENST00000359082 SEL1LQ9UBV2 794 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 NR1H3Q13133 447 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 DRAP1Q14919 205 aaPredicted RBP19.5■□□□□ 0.71
SHANK1-202ENST00000359082 TEDDM1Q5T9Z0 273 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 LRRC37BQ96QE4 947 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 HDAC6Q9UBN7 1215 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 ARAP3Q8WWN8 1544 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 ESYT3A0FGR9 886 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 FTLP02792 175 aaPredicted RBP19.5■□□□□ 0.71
SHANK1-202ENST00000359082 TOB2Q14106 344 aaPredicted RBP19.5■□□□□ 0.71
SHANK1-202ENST00000359082 KNOP1Q1ED39 458 aaKnown RBP19.5■□□□□ 0.71
SHANK1-202ENST00000359082 RFWD2Q8NHY2 731 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 RBM46Q8TBY0 533 aaKnown RBP19.5■□□□□ 0.71
SHANK1-202ENST00000359082 ACAP3Q96P50 834 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 RAP1GDS1P52306 607 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 SYCP2LQ5T4T6 812 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 C1orf54Q8WWF1 131 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 STRBPQ96SI9 672 aaKnown RBP19.5■□□□□ 0.71
SHANK1-202ENST00000359082 SIK2Q9H0K1 926 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 TDRD3Q9H7E2 651 aaKnown RBP19.5■□□□□ 0.71
SHANK1-202ENST00000359082 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.5■□□□□ 0.71
SHANK1-202ENST00000359082 ZNF335Q9H4Z2 1342 aaPredicted RBP19.5■□□□□ 0.71
SHANK1-202ENST00000359082 PRAMEP78395 509 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 MDH1BQ5I0G3 518 aa19.5■□□□□ 0.71
SHANK1-202ENST00000359082 CYFIP1Q7L576 1253 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms