RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 THAP2Q9H0W7 228 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 ZNF70Q9UC06 446 aaPredicted RBP13.15□□□□□ -0.3
COL20A1-201ENST00000358894 FOXN3O00409 490 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-201ENST00000358894 EML1O00423 815 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 PMS2P54278 862 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 IGBP1P78318 339 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 PACS2Q86VP3 889 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 NLRP14Q86W24 1093 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 SLC17A8Q8NDX2 589 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 GDAP1Q8TB36 358 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 POLR3CQ9BUI4 534 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-201ENST00000358894 KCNH7Q9NS40 1196 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 INO80B-WBP1J3KQ70 363 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 FANCGO15287 622 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 MMEP08473 750 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 ELF1P32519 619 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 PPP2R2AP63151 447 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 SLC35G1Q2M3R5 365 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 EPC2Q52LR7 807 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 FOXR1Q6PIV2 292 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 ZNF668Q96K58 619 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-201ENST00000358894 INO80BQ9C086 356 aaPredicted RBP13.14□□□□□ -0.31
COL20A1-201ENST00000358894 GPRC5CQ9NQ84 441 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 KCNG1Q9UIX4 513 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 ALG6Q9Y672 507 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 ZNF263O14978 683 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 PSAPP07602 524 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 MARK3P27448 753 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 KCNJ1P48048 391 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 PSMC5P62195 406 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 MXRA7P84157 204 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 RASA3Q14644 834 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 SLMAPQ14BN4 828 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 FAM133BQ5BKY9 247 aaKnown RBP13.14□□□□□ -0.31
COL20A1-201ENST00000358894 TMEM270Q6UE05 265 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 ZBTB8OSQ8IWT0 167 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 CDAN1Q8IWY9 1227 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 UNC45AQ9H3U1 944 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 ADAM22Q9P0K1 906 aa13.14□□□□□ -0.31
COL20A1-201ENST00000358894 PODXLO00592 558 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 FGFR4P22455 802 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 HSPA1LP34931 641 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 JAK3P52333 1124 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 RSAD2Q8WXG1 361 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 BAP1Q92560 729 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 ELAC2Q9BQ52 826 aaKnown RBP13.13□□□□□ -0.31
COL20A1-201ENST00000358894 TULP2O00295 520 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 FAM153BP0C7A2 387 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 SRGAP2CP0DJJ0 459 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 KRT76Q01546 638 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 FAM153CQ494X1 144 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 PPP1R21Q6ZMI0 780 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 CTAGE3PQ8IX95 158 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 KIRREL3Q8IZU9 778 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 MSTO1Q9BUK6 570 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 YIPF3Q9GZM5 350 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 FAM153AQ9UHL3 310 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 ZHX2Q9Y6X8 837 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 MYO3BQ8WXR4 1341 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 LRRD1A4D1F6 860 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 GMNCA6NCL1 334 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 SGK1O00141 431 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 PPP1R11O60927 126 aaPredicted RBP13.13□□□□□ -0.31
COL20A1-201ENST00000358894 SMIM24O75264 130 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 ITGA4P13612 1032 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 LSP1P33241 339 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 SCYL2Q6P3W7 929 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 GADL1Q6ZQY3 521 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 FBXL13Q8NEE6 735 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
COL20A1-201ENST00000358894 CALR3Q96L12 384 aaKnown RBP13.13□□□□□ -0.31
COL20A1-201ENST00000358894 CBWD1Q9BRT8 395 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 TRIM7Q9C029 511 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 EHD4Q9H223 541 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.13□□□□□ -0.31
COL20A1-201ENST00000358894 RGL2O15211 777 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 TMED2Q15363 201 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 MEI1Q5TIA1 1274 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 MIS18BP1Q6P0N0 1132 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 MOXD1Q6UVY6 613 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 AMIGO3Q86WK7 504 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 SLC35C1Q96A29 364 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 PPP1R16BQ96T49 567 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 MXRA8Q9BRK3 442 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 KLHL14Q9P2G3 628 aa13.13□□□□□ -0.31
COL20A1-201ENST00000358894 DIS3Q9Y2L1 958 aaKnown RBP13.13□□□□□ -0.31
COL20A1-201ENST00000358894 EIF3DO15371 548 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 KRT1P04264 644 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 HNRNPH1P31943 449 aaKnown RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 MDH1P40925 334 aaKnown RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 LRRC14Q15048 493 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 HP1BP3Q5SSJ5 553 aaPredicted RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 FAM151AQ8WW52 585 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 RUBCNQ92622 972 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 ARHGEF2Q92974 986 aaKnown RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 WRNIP1Q96S55 665 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 CNOT10Q9H9A5 744 aaKnown RBP13.12□□□□□ -0.31
COL20A1-201ENST00000358894 NRBP2Q9NSY0 501 aa13.12□□□□□ -0.31
COL20A1-201ENST00000358894 BAZ2AQ9UIF9 1905 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms