RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 SNED1Q8TER0 1413 aa9.19□□□□□ -0.94
GM2A-201ENST00000357164 PRPF4O43172 522 aaKnown RBP eCLIP9.19□□□□□ -0.94
GM2A-201ENST00000357164 PHF2O75151 1096 aa9.19□□□□□ -0.94
GM2A-201ENST00000357164 ASLP04424 464 aa9.19□□□□□ -0.94
GM2A-201ENST00000357164 ADSSP30520 456 aa9.19□□□□□ -0.94
GM2A-201ENST00000357164 CTSWP56202 376 aa9.19□□□□□ -0.94
GM2A-201ENST00000357164 MXRA7P84157 204 aa9.19□□□□□ -0.94
GM2A-201ENST00000357164 HLTFQ14527 1009 aaKnown RBP eCLIP9.19□□□□□ -0.94
GM2A-201ENST00000357164 USP41Q3LFD5 358 aa9.19□□□□□ -0.94
GM2A-201ENST00000357164 LRRC43Q8N309 656 aa9.19□□□□□ -0.94
GM2A-201ENST00000357164 OPTNQ96CV9 577 aa9.19□□□□□ -0.94
GM2A-201ENST00000357164 NSRP1Q9H0G5 558 aaKnown RBP9.19□□□□□ -0.94
GM2A-201ENST00000357164 METTL14Q9HCE5 456 aaKnown RBP9.19□□□□□ -0.94
GM2A-201ENST00000357164 BARHL2Q9NY43 387 aa9.19□□□□□ -0.94
GM2A-201ENST00000357164 DBR1Q9UK59 544 aaKnown RBP9.19□□□□□ -0.94
GM2A-201ENST00000357164 SIPA1L1O43166 1804 aa9.19□□□□□ -0.94
GM2A-201ENST00000357164 FOXO6A8MYZ6 492 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 CEP104O60308 925 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 DNAJC6O75061 913 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 PON1P27169 355 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 VHLP40337 213 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 TRMT10CQ7L0Y3 403 aaKnown RBP9.18□□□□□ -0.94
GM2A-201ENST00000357164 LCA5Q86VQ0 697 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 FAM133AQ8N9E0 248 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 MMRN2Q9H8L6 949 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 TXLNGQ9NUQ3 528 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 USP40Q9NVE5 1235 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 STK17AQ9UEE5 414 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 BZW2Q9Y6E2 419 aaKnown RBP9.18□□□□□ -0.94
GM2A-201ENST00000357164 FER1L6Q2WGJ9 1857 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 RAD21O60216 631 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 CCDC166P0CW27 439 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 EPHB2P29323 1055 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 SCNN1BP51168 640 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 MAP3K10Q02779 954 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 PPP2R5EQ16537 467 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 DSTYKQ6XUX3 929 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 RNF111Q6ZNA4 994 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 C18orf8Q96DM3 657 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 KCNK13Q9HB14 408 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 ETNK1Q9HBU6 452 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 SAR1AQ9NR31 198 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 COMMD3-BMI1R4GMX3 469 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 MROH5Q6ZUA9 1318 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 IRS2Q9Y4H2 1338 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 BPTFQ12830 3046 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 LYNP07948 512 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 GBP1P32455 592 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 RAP1GDS1P52306 607 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 CACNA2D1P54289 1103 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 MCL1Q07820 350 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 SFSWAPQ12872 951 aaKnown RBP9.18□□□□□ -0.94
GM2A-201ENST00000357164 PUM3Q15397 648 aaKnown RBP9.18□□□□□ -0.94
GM2A-201ENST00000357164 LARGE2Q8N3Y3 721 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 RAD54LQ92698 747 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 NUDT12Q9BQG2 462 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 MMADHCQ9H3L0 296 aaPredicted RBP9.18□□□□□ -0.94
GM2A-201ENST00000357164 OSGEPQ9NPF4 335 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 PDP2Q9P2J9 529 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 CD2APQ9Y5K6 639 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 UMODL1Q5DID0 1318 aa9.18□□□□□ -0.94
GM2A-201ENST00000357164 MAGEA13PA6NCF6 341 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 RGS16O15492 202 aaPredicted RBP9.17□□□□□ -0.94
GM2A-201ENST00000357164 NMT2O60551 498 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 SMIM18P0DKX4 95 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 UCHL3P15374 230 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 KIF5BP33176 963 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 CDK7P50613 346 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 POLR2FP61218 127 aaKnown RBP9.17□□□□□ -0.94
GM2A-201ENST00000357164 LACTBP83111 547 aaPredicted RBP9.17□□□□□ -0.94
GM2A-201ENST00000357164 DEUP1Q05D60 604 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 GRM4Q14833 912 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 PTPROQ16827 1216 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 CCDC178Q5BJE1 867 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 DENND2CQ68D51 928 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 SH3RF3Q8TEJ3 882 aaPredicted RBP9.17□□□□□ -0.94
GM2A-201ENST00000357164 MZB1Q8WU39 189 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 SCG3Q8WXD2 468 aaKnown RBP9.17□□□□□ -0.94
GM2A-201ENST00000357164 FGD4Q96M96 766 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 DDX23Q9BUQ8 820 aaKnown RBP9.17□□□□□ -0.94
GM2A-201ENST00000357164 UBAP1LF5GYI3 381 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 VILLO15195 856 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 NVLO15381 856 aaKnown RBP9.17□□□□□ -0.94
GM2A-201ENST00000357164 TYROBPO43914 113 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 EDF1O60869 148 aaKnown RBP9.17□□□□□ -0.94
GM2A-201ENST00000357164 ATP9AO75110 1047 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 HIP1RO75146 1068 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 LMNAP02545 664 aaKnown RBP9.17□□□□□ -0.94
GM2A-201ENST00000357164 FGGP02679 453 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 CAPNS1P04632 268 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 TMEM253P0C7T8 217 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 CALML3P27482 149 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 ODF2Q5BJF6 829 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 C11orf63Q6NUN7 778 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 SCFD1Q8WVM8 642 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 SKA1Q96BD8 255 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 PPP1R14BQ96C90 147 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 LSM14BQ9BX40 385 aaKnown RBP9.17□□□□□ -0.94
GM2A-201ENST00000357164 CTTNBP2NLQ9P2B4 639 aa9.17□□□□□ -0.94
GM2A-201ENST00000357164 DNAJB4Q9UDY4 337 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms