RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 KRT17Q04695 432 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 USP17L24Q0WX57 530 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 USP17L6PQ6QN14 398 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 CATSPER1Q8NEC5 780 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 C1orf54Q8WWF1 131 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 SSU72P8A0A1W2PR75 194 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 PGM1P36871 562 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 CHP1Q99653 195 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 PRMT1Q99873 361 aaKnown RBP15.77■□□□□ 0.11
CHD4-201ENST00000357008 SLC13A4Q9UKG4 626 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 SMG5Q9UPR3 1016 aaKnown RBP15.77■□□□□ 0.11
CHD4-201ENST00000357008 SLC16A4O15374 487 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 SDC4P31431 198 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 CYP4F11Q9HBI6 524 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 SLC9A2Q9UBY0 812 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 ZNF185O15231 689 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 FCER1AP12319 257 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 ATL2Q8NHH9 583 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 TTC8Q8TAM2 541 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 DCP1AQ9NPI6 582 aaPredicted RBP15.76■□□□□ 0.11
CHD4-201ENST00000357008 FGFR4P22455 802 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 GNA15P30679 374 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 HDAC4P56524 1084 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 ROR1Q01973 937 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 SLC18A3Q16572 532 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 SLC13A1Q9BZW2 595 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 TRAF3IP3Q9Y228 551 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 NEO1Q92859 1461 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 MAPK6Q16659 721 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 SUPT20HL1Q3ZLR7 823 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 HEATR6Q6AI08 1181 aaKnown RBP15.76■□□□□ 0.11
CHD4-201ENST00000357008 SH2D3CQ8N5H7 860 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 TMEM260Q9NX78 707 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 HPCAL4Q9UM19 191 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 POTEFA5A3E0 1075 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 PPP1R12AO14974 1030 aaPredicted RBP15.76■□□□□ 0.11
CHD4-201ENST00000357008 POTEIP0CG38 1075 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 EXOSC10Q01780 885 aaKnown RBP15.76■□□□□ 0.11
CHD4-201ENST00000357008 HIC1Q14526 733 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 POTEGQ6S5H5 508 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 POTEEQ6S8J3 1075 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 AGGF1Q8N302 714 aaeCLIP15.76■□□□□ 0.114e-7■■■□□ 14.7
CHD4-201ENST00000357008 EFCAB6Q5THR3 1501 aa15.76■□□□□ 0.11
CHD4-201ENST00000357008 SNX2O60749 519 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 SRGNP10124 158 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 AARSP49588 968 aaKnown RBP eCLIP15.75■□□□□ 0.112e-6■■■□□ 18.8
CHD4-201ENST00000357008 KRT76Q01546 638 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 TNFAIP2Q03169 654 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 HABP4Q5JVS0 413 aaKnown RBP15.75■□□□□ 0.11
CHD4-201ENST00000357008 RABGAP1LQ5R372 815 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 PARD3BQ8TEW8 1205 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 FSD1LQ9BXM9 530 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 CPVLQ9H3G5 476 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 TRABDQ9H4I3 376 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 PCSK1NQ9UHG2 260 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 USP15Q9Y4E8 981 aaPredicted RBP15.75■□□□□ 0.11
CHD4-201ENST00000357008 BCAR1P56945 870 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 FBXW10Q5XX13 1052 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 CDKL3Q8IVW4 592 aaPredicted RBP15.75■□□□□ 0.11
CHD4-201ENST00000357008 MAGEB5Q9BZ81 275 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 BFARQ9NZS9 450 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 STX18Q9P2W9 335 aaKnown RBP15.75■□□□□ 0.11
CHD4-201ENST00000357008 DENND3A2RUS2 1198 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 NMT2O60551 498 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 PCYT1AP49585 367 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 NR1I3Q14994 352 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 RC3H1Q5TC82 1133 aaKnown RBP15.75■□□□□ 0.11
CHD4-201ENST00000357008 AGBL2Q5U5Z8 902 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 FAM167AQ96KS9 214 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 AGPAT1Q99943 283 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 NLRP1Q9C000 1473 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 PSMC1P62191 440 aaKnown RBP15.75■□□□□ 0.11
CHD4-201ENST00000357008 MAPRE2Q15555 327 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 DSTYKQ6XUX3 929 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 GFM2Q969S9 779 aaKnown RBP15.75■□□□□ 0.11
CHD4-201ENST00000357008 PRR36Q9H6K5 1346 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 EIF4E1BA6NMX2 242 aaKnown RBP15.75■□□□□ 0.11
CHD4-201ENST00000357008 P4HBP07237 508 aaKnown RBP15.75■□□□□ 0.11
CHD4-201ENST00000357008 CHN1P15882 459 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 SLC1A1P43005 524 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 CLEC4GQ6UXB4 293 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 EEPD1Q7L9B9 569 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 CCSER1Q9C0I3 900 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 PITPNM2Q9BZ72 1349 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 CIITAP33076 1130 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 TAP1Q03518 808 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 FAM196AQ6ZSG2 479 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 FRA10AC1Q70Z53 315 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 RASSF3Q86WH2 238 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 IL17RAQ96F46 866 aa15.75■□□□□ 0.11
CHD4-201ENST00000357008 STXBP3O00186 592 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 PDXKO00764 312 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 CDH16O75309 829 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 GH2P01242 217 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 HIF1AQ16665 826 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 NBPF3Q9H094 633 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 KIF9Q9HAQ2 790 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 GSG1L2A8MUP6 293 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 RTN2O75298 545 aa15.74■□□□□ 0.11
CHD4-201ENST00000357008 TYK2P29597 1187 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms