RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 CNNM3Q8NE01 707 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 VN1R2Q8NFZ6 395 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 MS4A3Q96HJ5 214 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 DYDC2Q96IM9 177 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 MTRQ99707 1265 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 APOL5Q9BWW9 433 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 GBP3Q9H0R5 595 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 KCNH6Q9H252 994 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 UBN1Q9NPG3 1134 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 BMP2KQ9NSY1 1161 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-204ENST00000356316 AGPAT5Q9NUQ2 364 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 NR2E1Q9Y466 385 aa11.89□□□□□ -0.51
CAPN3-204ENST00000356316 CNTNAP2Q9UHC6 1331 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 OFD1O75665 1012 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 SLITRK3O94933 977 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 TXKP42681 527 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 ITIH3Q06033 890 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 KCNC3Q14003 757 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 EMC2Q15006 297 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 PCBP1Q15365 356 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAPN3-204ENST00000356316 SAFBQ15424 915 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAPN3-204ENST00000356316 ME3Q16798 604 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 TRIM67Q6ZTA4 783 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 HFE2Q6ZVN8 426 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 ZBTB33Q86T24 672 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 DDX53Q86TM3 631 aaKnown RBP11.88□□□□□ -0.51
CAPN3-204ENST00000356316 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 RNF149Q8NC42 400 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 SUSD6Q92537 303 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 GTF3C6Q969F1 213 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 PBXIP1Q96AQ6 731 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 IGSF21Q96ID5 467 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 NECTIN4Q96NY8 510 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 EIF2AK1Q9BQI3 630 aaKnown RBP11.88□□□□□ -0.51
CAPN3-204ENST00000356316 S1PR5Q9H228 398 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 NRDE2Q9H7Z3 1164 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 TTC12Q9H892 705 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-204ENST00000356316 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 TBC1D13Q9NVG8 400 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 WRAP73Q9P2S5 460 aaPredicted RBP11.88□□□□□ -0.51
CAPN3-204ENST00000356316 HCFC2Q9Y5Z7 792 aa11.88□□□□□ -0.51
CAPN3-204ENST00000356316 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.87□□□□□ -0.51
CAPN3-204ENST00000356316 NEMFO60524 1076 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 CLASP2O75122 1294 aaKnown RBP11.87□□□□□ -0.51
CAPN3-204ENST00000356316 NR1I2O75469 434 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 GALTP07902 379 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 ITGA4P13612 1032 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 FDPSP14324 419 aaKnown RBP11.87□□□□□ -0.51
CAPN3-204ENST00000356316 ZXDAP98168 799 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 EARS2Q5JPH6 523 aaKnown RBP11.87□□□□□ -0.51
CAPN3-204ENST00000356316 SYCE2Q6PIF2 218 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 MRPL10Q7Z7H8 261 aaKnown RBP11.87□□□□□ -0.51
CAPN3-204ENST00000356316 PPFIBP1Q86W92 1011 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 SUGP1Q8IWZ8 645 aaKnown RBP11.87□□□□□ -0.51
CAPN3-204ENST00000356316 HACE1Q8IYU2 909 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 RIPOR3Q96MK2 946 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 EMILIN2Q9BXX0 1053 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 ADAM7Q9H2U9 754 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 RSAD1Q9HA92 442 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 ANKEF1Q9NU02 776 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 FAN1Q9Y2M0 1017 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
CAPN3-204ENST00000356316 TMEM221A6NGB7 291 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 BTBD18B2RXH4 712 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 INO80B-WBP1J3KQ70 363 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 M0R296 226 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 ZBTB39O15060 712 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 DGAT1O75907 488 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 POMCP01189 267 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 CTSAP10619 480 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 XRCC6P12956 609 aaKnown RBP eCLIP11.86□□□□□ -0.51
CAPN3-204ENST00000356316 AXLP30530 894 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 MTHFRP42898 656 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 FOSBP53539 338 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 SPIRE1Q08AE8 756 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 ATAT1Q5SQI0 421 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 NOTUMQ6P988 496 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 BMP8AQ7Z5Y6 402 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 DIS3L2Q8IYB7 885 aaKnown RBP11.86□□□□□ -0.51
CAPN3-204ENST00000356316 HSD17B14Q9BPX1 270 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 TMEM175Q9BSA9 504 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 TRIM6Q9C030 488 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-204ENST00000356316 ZBP1Q9H171 429 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 MINDY3Q9H8M7 445 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 DZANK1Q9NVP4 752 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 DNAJB4Q9UDY4 337 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 SSX2IPQ9Y2D8 614 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 IRAK3Q9Y616 596 aa11.86□□□□□ -0.51
CAPN3-204ENST00000356316 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 MEIS3P2A8K0S8 358 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 NCLP19338 710 aaKnown RBP11.85□□□□□ -0.51
CAPN3-204ENST00000356316 ATP2B1P20020 1258 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 SP100P23497 879 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-204ENST00000356316 KLRC2P26717 231 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 HOXA11P31270 313 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-204ENST00000356316 SLC11A1P49279 550 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 PTENP60484 403 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 POU5F1BQ06416 359 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 RARS2Q5T160 578 aaKnown RBP11.85□□□□□ -0.51
CAPN3-204ENST00000356316 ELMSAN1Q6PJG2 1045 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms