RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 GPBP1L1Q9HC44 474 aaPredicted RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 WBP11Q9Y2W2 641 aaKnown RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 V9GYQ6 96 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ATP8B3O60423 1300 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ADGRL1O94910 1474 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 IL6P05231 212 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ELF1P32519 619 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 CIITAP33076 1130 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 TALDO1P37837 337 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 PPP3CCP48454 512 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 CCDC134Q9H6E4 229 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 CAAP1Q9H8G2 361 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 IARS2Q9NSE4 1012 aaKnown RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 GALNT8Q9NY28 637 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 FAM25AB3EWG3 89 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 FAM25CB3EWG5 89 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 FAM25GB3EWG6 89 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 AREL1O15033 823 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 MRPS25P82663 173 aaKnown RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 NCF4Q15080 339 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 KIAA1755Q5JYT7 1200 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 MFN1Q8IWA4 741 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 CLMNQ96JQ2 1002 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 THTPAQ9BU02 230 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 TRIM54Q9BYV2 358 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ARPP21Q9UBL0 812 aaPredicted RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 DSEQ9UL01 958 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 MAP3K5Q99683 1374 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ZMYM4Q5VZL5 1548 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ATP1A4Q13733 1029 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 CMTR1Q8N1G2 835 aaKnown RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ATP8B4Q8TF62 1192 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 GJA10Q969M2 543 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 PRMT1Q99873 361 aaKnown RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 HSPBP1Q9NZL4 362 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 DAPK2Q9UIK4 370 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 MORC2Q9Y6X9 1032 aaPredicted RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 CENPXA8MT69 81 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 GGCXP38435 758 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 MTERF2Q49AM1 385 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 GPR141Q7Z602 305 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 SLFN12Q8IYM2 578 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 PPP1R16BQ96T49 567 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 SEPT9Q9UHD8 586 aaPredicted RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 SH3GLB1Q9Y371 365 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 MRC2Q9UBG0 1479 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ARHGEF11O15085 1522 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 MLNP12872 115 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ABCE1P61221 599 aaKnown RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ZNF618Q5T7W0 954 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 CCDC24Q8N4L8 307 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 C7orf25Q9BPX7 421 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 SERHL2Q9H4I8 314 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 UBE2TQ9NPD8 197 aaPredicted RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 SERHLQ9NQF3 203 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 C20orf96Q9NUD7 363 aaPredicted RBP8.5□□□□□ -1.05
SCN8A-201ENST00000354534 SMIM31A0A1B0GVY4 71 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 GFPT2O94808 682 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 LRRC14Q15048 493 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 RMI1Q9H9A7 625 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ING3Q9NXR8 418 aa8.5□□□□□ -1.05
SCN8A-201ENST00000354534 ALBP02768 609 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 ANXA13P27216 316 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 TRIQKQ629K1 86 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 TTC33Q6PID6 262 aaPredicted RBP8.49□□□□□ -1.05
SCN8A-201ENST00000354534 KRT28Q7Z3Y7 464 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 HIC2Q96JB3 615 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 THRAP3Q9Y2W1 955 aaKnown RBP8.49□□□□□ -1.05
SCN8A-201ENST00000354534 HEY1Q9Y5J3 304 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 SMCO3A2RU48 225 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 KRT38O76015 456 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 HMOX2P30519 316 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 COBLL1Q53SF7 1204 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 RETREG2Q8NC44 543 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 ATP6V1HQ9UI12 483 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 THOC2Q8NI27 1593 aaKnown RBP8.49□□□□□ -1.05
SCN8A-201ENST00000354534 MAP3K15Q6ZN16 1313 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 LAYNQ6UX15 382 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 SEPT1Q8WYJ6 367 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 USP1O94782 785 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 PPP2R2AP63151 447 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 KRT39Q6A163 491 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 SYNDIG1Q9H7V2 258 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 NRBP1Q9UHY1 535 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 C10orf53Q8N6V4 93 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 WDR60Q8WVS4 1066 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 SOWAHDA6NJG2 315 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 DCTN2Q13561 401 aaKnown RBP8.49□□□□□ -1.05
SCN8A-201ENST00000354534 ZNF827Q17R98 1081 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 MRPL50Q8N5N7 158 aaKnown RBP8.49□□□□□ -1.05
SCN8A-201ENST00000354534 NRDE2Q9H7Z3 1164 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 STK17AQ9UEE5 414 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 POLIQ9UNA4 740 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 SNTNA6NMZ2 147 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 PGM3O95394 542 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 EIF2S3LQ2VIR3 472 aaKnown RBP8.49□□□□□ -1.05
SCN8A-201ENST00000354534 ESRP1Q6NXG1 681 aaKnown RBP8.49□□□□□ -1.05
SCN8A-201ENST00000354534 MAGEB5Q9BZ81 275 aa8.49□□□□□ -1.05
SCN8A-201ENST00000354534 NHEJ1Q9H9Q4 299 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms