RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PALB2Q86YC2 1186 aa17.87■□□□□ 0.45
DDX55-202ENST00000354291 SMAP1Q8IYB5 467 aaPredicted RBP17.87■□□□□ 0.45
DDX55-202ENST00000354291 FANCBQ8NB91 859 aa17.87■□□□□ 0.45
DDX55-202ENST00000354291 PHKBQ93100 1093 aa17.87■□□□□ 0.45
DDX55-202ENST00000354291 ZNF707Q96C28 371 aaPredicted RBP17.87■□□□□ 0.45
DDX55-202ENST00000354291 TRAIPQ9BWF2 469 aa17.87■□□□□ 0.45
DDX55-202ENST00000354291 RHOBTB2Q9BYZ6 727 aa17.87■□□□□ 0.45
DDX55-202ENST00000354291 ZSCAN32Q9NX65 697 aa17.87■□□□□ 0.45
DDX55-202ENST00000354291 SSX2IPQ9Y2D8 614 aa17.87■□□□□ 0.45
DDX55-202ENST00000354291 SLC12A7Q9Y666 1083 aa17.87■□□□□ 0.45
DDX55-202ENST00000354291 A0A087WZ62 844 aa17.86■□□□□ 0.45
DDX55-202ENST00000354291 SH2B2O14492 632 aaPredicted RBP17.86■□□□□ 0.45
DDX55-202ENST00000354291 GAS2O43903 313 aaKnown RBP17.86■□□□□ 0.45
DDX55-202ENST00000354291 SOD2P04179 222 aa17.86■□□□□ 0.45
DDX55-202ENST00000354291 OATP04181 439 aa17.86■□□□□ 0.45
DDX55-202ENST00000354291 SFPQP23246 707 aaKnown RBP eCLIP17.86■□□□□ 0.45
DDX55-202ENST00000354291 AFF1P51825 1210 aaKnown RBP17.86■□□□□ 0.45
DDX55-202ENST00000354291 DRP2Q13474 957 aa17.86■□□□□ 0.45
DDX55-202ENST00000354291 COL9A3Q14050 684 aaPredicted RBP17.86■□□□□ 0.45
DDX55-202ENST00000354291 SLC44A4Q53GD3 710 aa17.86■□□□□ 0.45
DDX55-202ENST00000354291 PPM1JQ5JR12 505 aa17.86■□□□□ 0.45
DDX55-202ENST00000354291 JAKMIP3Q5VZ66 844 aa17.86■□□□□ 0.45
DDX55-202ENST00000354291 TSSK4Q6SA08 328 aa17.86■□□□□ 0.45
DDX55-202ENST00000354291 PGBD4Q96DM1 585 aa17.86■□□□□ 0.45
DDX55-202ENST00000354291 FDXACB1Q9BRP7 624 aaPredicted RBP17.86■□□□□ 0.45
DDX55-202ENST00000354291 MTA3Q9BTC8 594 aa17.86■□□□□ 0.45
DDX55-202ENST00000354291 NT5C3AQ9H0P0 336 aa17.86■□□□□ 0.45
DDX55-202ENST00000354291 PRG3Q9Y2Y8 225 aaPredicted RBP17.86■□□□□ 0.45
DDX55-202ENST00000354291 IGLV3-22A0A075B6J6 115 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 ZNF862O60290 1169 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 ZNF623O75123 536 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 POMCP01189 267 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 CD72P21854 359 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 TGM1P22735 817 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 MYH9P35579 1960 aaKnown RBP17.85■□□□□ 0.45
DDX55-202ENST00000354291 PARM1Q6UWI2 310 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 CATSPER4Q7RTX7 472 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 ZBTB44Q8NCP5 570 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 TMEM175Q9BSA9 504 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 EPC1Q9H2F5 836 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 PARD6AQ9NPB6 346 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 GMEB2Q9UKD1 530 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 PCDHB2Q9Y5E7 798 aa17.85■□□□□ 0.45
DDX55-202ENST00000354291 DOCK8Q8NF50 2099 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 KCNA4P22459 653 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 MCM5P33992 734 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 RAB27AP51159 221 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 CDC42EP1Q00587 391 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 PRKCEQ02156 737 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 AP3B2Q13367 1082 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 MLF2Q15773 248 aaPredicted RBP17.84■□□□□ 0.45
DDX55-202ENST00000354291 AGMOQ6ZNB7 445 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 CENPQQ7L2Z9 268 aaPredicted RBP17.84■□□□□ 0.45
DDX55-202ENST00000354291 FGF14Q92915 247 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 ESYT1Q9BSJ8 1104 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 PRKD2Q9BZL6 878 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 INO80BQ9C086 356 aaPredicted RBP17.84■□□□□ 0.45
DDX55-202ENST00000354291 LSG1Q9H089 658 aaKnown RBP17.84■□□□□ 0.45
DDX55-202ENST00000354291 KANSL3Q9P2N6 904 aa17.84■□□□□ 0.45
DDX55-202ENST00000354291 V9GY48 417 aaPredicted RBP17.84■□□□□ 0.45
DDX55-202ENST00000354291 TBC1D4O60343 1298 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 FSHRP23945 695 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 OR1G1P47890 313 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 GLUD2P49448 558 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 DNM2P50570 870 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 PRKCQQ04759 706 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 SPEM2Q0P670 501 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 LPAL2Q16609 132 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 MICU3Q86XE3 530 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 GLYCTKQ8IVS8 523 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 TMEM87BQ96K49 555 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 HERC2P3Q9BVR0 1158 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 PLEKHA4Q9H4M7 779 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 DISC1Q9NRI5 854 aa17.83■□□□□ 0.44
DDX55-202ENST00000354291 WDR64B1ANS9 1081 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 LILRB5O75023 590 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 CYP3A4P08684 503 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 CLK2P49760 499 aaKnown RBP17.82■□□□□ 0.44
DDX55-202ENST00000354291 MTERF2Q49AM1 385 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 PRR16Q569H4 304 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 BMP2KLQ5H9B9 411 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 ZBTB41Q5SVQ8 909 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 PPP1R18Q6NYC8 613 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 RHPN2Q8IUC4 686 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 TEX2Q8IWB9 1127 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 HDAC7Q8WUI4 952 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 DDX23Q9BUQ8 820 aaKnown RBP17.82■□□□□ 0.44
DDX55-202ENST00000354291 GLT8D2Q9H1C3 349 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 RSAD1Q9HA92 442 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 RXFP1Q9HBX9 757 aa17.82■□□□□ 0.44
DDX55-202ENST00000354291 SUCLA2Q9P2R7 463 aaPredicted RBP17.82■□□□□ 0.44
DDX55-202ENST00000354291 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.82■□□□□ 0.44
DDX55-202ENST00000354291 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.81■□□□□ 0.44
DDX55-202ENST00000354291 SLC27A2O14975 620 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 TGM5O43548 720 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 LIFRP42702 1097 aa17.81■□□□□ 0.44
DDX55-202ENST00000354291 SETQ01105 290 aaPredicted RBP17.81■□□□□ 0.44
DDX55-202ENST00000354291 COL9A2Q14055 689 aaPredicted RBP17.81■□□□□ 0.44
DDX55-202ENST00000354291 NECTIN1Q15223 517 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms