RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 IGKV6D-41A0A0C4DH26 115 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 STRNO43815 780 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 GIT2Q14161 759 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 PGM5Q15124 567 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 TTI2Q6NXR4 508 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 ANKRD13CQ8N6S4 541 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 RSAD2Q8WXG1 361 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 GBA2Q9HCG7 927 aaPredicted RBP13.05□□□□□ -0.32
SMAD9-201ENST00000350148 APEX2Q9UBZ4 518 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 CCDC151A5D8V7 595 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 VEGFAP15692 232 aaPredicted RBP13.05□□□□□ -0.32
SMAD9-201ENST00000350148 ZNF157P51786 506 aaPredicted RBP13.05□□□□□ -0.32
SMAD9-201ENST00000350148 STILQ15468 1287 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 KCNMB3Q9NPA1 279 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 MYBP10242 640 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 E2F4Q16254 413 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 SPATC1LQ9H0A9 340 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 ATRNL1Q5VV63 1379 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 STRCP1A6NGW2 1772 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 GOLGA8KD6RF30 607 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 CAPN9O14815 690 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 EXTL3O43909 919 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 FKBP1BP68106 108 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 THNSL1Q8IYQ7 743 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 ABI1Q8IZP0 508 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 FBF1Q8TES7 1133 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 DHX38Q92620 1227 aaKnown RBP13.05□□□□□ -0.32
SMAD9-201ENST00000350148 CYP26B1Q9NR63 512 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 NKIRAS1Q9NYS0 192 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 FAM169AQ9Y6X4 670 aa13.05□□□□□ -0.32
SMAD9-201ENST00000350148 GARTP22102 1010 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 EPHB4P54760 987 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 ZNF280AP59817 542 aaPredicted RBP13.04□□□□□ -0.32
SMAD9-201ENST00000350148 PRAMEF18Q5VWM3 479 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 TMEM8AQ9HCN3 771 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 SYNGAP1Q96PV0 1343 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 LTBP3Q9NS15 1303 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 LPXNO60711 386 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 ARP10275 920 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 NAMPTP43490 491 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 EARS2Q5JPH6 523 aaKnown RBP13.04□□□□□ -0.32
SMAD9-201ENST00000350148 DENND2CQ68D51 928 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 GPIHBP1Q8IV16 184 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 TNFRSF25Q93038 417 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 ZNF560Q96MR9 790 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 INTUQ9ULD6 942 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 CELF2O95319 508 aaKnown RBP13.04□□□□□ -0.32
SMAD9-201ENST00000350148 CYP27A1Q02318 531 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 COBLL1Q53SF7 1204 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 CATSPERGQ6ZRH7 1159 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 PLEKHH3Q7Z736 793 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 ERICH1Q86X53 443 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 TRIM50Q86XT4 487 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 LMNTD2Q8IXW0 634 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 ANKS4BQ8N8V4 417 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 NUDT12Q9BQG2 462 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 NXF1Q9UBU9 619 aaKnown RBP13.04□□□□□ -0.32
SMAD9-201ENST00000350148 ADAMTS7Q9UKP4 1686 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 GTPBP10A4D1E9 387 aaKnown RBP13.04□□□□□ -0.32
SMAD9-201ENST00000350148 PHBP35232 272 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 RWDD2BP57060 319 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 DNAJC21Q5F1R6 531 aaKnown RBP13.04□□□□□ -0.32
SMAD9-201ENST00000350148 TC2NQ8N9U0 490 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 ANKRD7Q92527 254 aa13.04□□□□□ -0.32
SMAD9-201ENST00000350148 ZCCHC17Q9NP64 241 aaKnown RBP13.04□□□□□ -0.32
SMAD9-201ENST00000350148 CLCN6P51797 869 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 DGKDQ16760 1214 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 PPP1R21Q6ZMI0 780 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 ZNF677Q86XU0 584 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 PPP1R14CQ8TAE6 165 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 FAM49AQ9H0Q0 323 aaPredicted RBP13.03□□□□□ -0.32
SMAD9-201ENST00000350148 A6NJR5 290 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 DDNO94850 711 aaPredicted RBP13.03□□□□□ -0.32
SMAD9-201ENST00000350148 HUNKP57058 714 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 SNRNP35Q16560 246 aaKnown RBP13.03□□□□□ -0.32
SMAD9-201ENST00000350148 SLC18A3Q16572 532 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 C6orf163Q5TEZ5 329 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 RIOX2Q8IUF8 465 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 RNF149Q8NC42 400 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 PNMA5Q96PV4 448 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 C4BP0C0L5 1744 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 NFIBO00712 420 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 ZC3H11AO75152 810 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMAD9-201ENST00000350148 ZNF18P17022 549 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 RGS2P41220 211 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 CPT1AP50416 773 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 HERVK_113P62684 666 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 BIRC2Q13490 618 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 OTOP1Q7RTM1 612 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 RFFLQ8WZ73 363 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 APOL6Q9BWW8 343 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 TBX20Q9UMR3 447 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 ALDH3A1P30838 453 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 CA8P35219 290 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 PEX19P40855 299 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 MDM2Q00987 491 aaPredicted RBP13.03□□□□□ -0.32
SMAD9-201ENST00000350148 METTL7BQ6UX53 244 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 RNF169Q8NCN4 708 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 SPIRE2Q8WWL2 714 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 RUSC1Q9BVN2 902 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms