RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TIMM10P62072 90 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 TNIP1Q15025 636 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 LONRF1Q17RB8 773 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 TAOK1Q7L7X3 1001 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 RIN3Q8TB24 985 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 SMC6Q96SB8 1091 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 SETDB2Q96T68 719 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 STK33Q9BYT3 514 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 NT5C3AQ9H0P0 336 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 DDX25Q9UHL0 483 aaKnown RBP11.41□□□□□ -0.58
CAPN3-203ENST00000349748 TRPC5Q9UL62 973 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-203ENST00000349748 TSC22D4Q9Y3Q8 395 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 B4E1Z4 1266 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 DDX3XO00571 662 aaKnown RBP eCLIP11.41□□□□□ -0.58
CAPN3-203ENST00000349748 ARID5AQ03989 594 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 DCTN2Q13561 401 aaKnown RBP11.41□□□□□ -0.58
CAPN3-203ENST00000349748 POTEAQ6S8J7 498 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 BARGINQ6ZT62 677 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 MYOCDQ8IZQ8 938 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 METTL13Q8N6R0 699 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 FBXO25Q8TCJ0 367 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 ANKS1AQ92625 1134 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 ESR2Q92731 530 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 ERGIC2Q96RQ1 377 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 CADM1Q9BY67 442 aaKnown RBP11.41□□□□□ -0.58
CAPN3-203ENST00000349748 PITPNM3Q9BZ71 974 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 KIAA1522Q9P206 1035 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-203ENST00000349748 HESX1Q9UBX0 185 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 SNX24Q9Y343 169 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 TIMM22Q9Y584 194 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 RPTORQ8N122 1335 aa11.41□□□□□ -0.58
CAPN3-203ENST00000349748 SERPINB7O75635 380 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 POLR2FP61218 127 aaKnown RBP11.4□□□□□ -0.58
CAPN3-203ENST00000349748 MTFR1Q15390 333 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 HGSNATQ68CP4 663 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 TMEM214Q6NUQ4 689 aaKnown RBP11.4□□□□□ -0.58
CAPN3-203ENST00000349748 TBC1D10CQ8IV04 446 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 DIS3LQ8TF46 1054 aaKnown RBP11.4□□□□□ -0.58
CAPN3-203ENST00000349748 PRPF31Q8WWY3 499 aaKnown RBP11.4□□□□□ -0.58
CAPN3-203ENST00000349748 SPOCK2Q92563 424 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 GLG1Q92896 1179 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.4□□□□□ -0.58
CAPN3-203ENST00000349748 ZDHHC18Q9NUE0 388 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 DDX43Q9NXZ2 648 aaKnown RBP11.4□□□□□ -0.58
CAPN3-203ENST00000349748 PTTG2Q9NZH5 202 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 STK24Q9Y6E0 443 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 C4AP0C0L4 1744 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 C4BP0C0L5 1744 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 PSMA7O14818 248 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 VILLO15195 856 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 PRPF3O43395 683 aaKnown RBP11.4□□□□□ -0.58
CAPN3-203ENST00000349748 ZNF862O60290 1169 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 GTF2H1P32780 548 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 STX2P32856 288 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 CDR2Q01850 454 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 FIGNQ5HY92 759 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 RBM44Q6ZP01 1051 aaKnown RBP11.4□□□□□ -0.58
CAPN3-203ENST00000349748 ANKRD13DQ6ZTN6 518 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 FNDC8Q8TC99 324 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 ACTRT1Q8TDG2 376 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 SEC14L1Q92503 715 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 STMN2Q93045 179 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 TCP11L1Q9NUJ3 509 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 IQSEC3Q9UPP2 1182 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-203ENST00000349748 ITM2BQ9Y287 266 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 SIK3Q9Y2K2 1263 aa11.4□□□□□ -0.58
CAPN3-203ENST00000349748 ERVV-2B6SEH9 535 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 FOXN2P32314 431 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 KLRC3Q07444 240 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.59
CAPN3-203ENST00000349748 TAF1BQ53T94 588 aaPredicted RBP11.4□□□□□ -0.59
CAPN3-203ENST00000349748 LMBRD2Q68DH5 695 aaPredicted RBP11.4□□□□□ -0.59
CAPN3-203ENST00000349748 ANKRD40Q6AI12 368 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 SEPT12Q8IYM1 358 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 SLC7A5P1Q8MH63 180 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 BAP1Q92560 729 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 PLIN2Q99541 437 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 CDCA7Q9BWT1 371 aaPredicted RBP11.4□□□□□ -0.59
CAPN3-203ENST00000349748 EBF3Q9H4W6 596 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 USP29Q9HBJ7 922 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 FAIMQ9NVQ4 179 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 STX18Q9P2W9 335 aaKnown RBP11.4□□□□□ -0.59
CAPN3-203ENST00000349748 SLC4A4Q9Y6R1 1079 aa11.4□□□□□ -0.59
CAPN3-203ENST00000349748 MYH6P13533 1939 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 OXSR1O95747 527 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-203ENST00000349748 PCSK6P29122 969 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 RGS2P41220 211 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 KCNQ4P56696 695 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 COG7P83436 770 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 NKX1-1Q15270 411 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-203ENST00000349748 EXOC3L4Q17RC7 722 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 B3GNT6Q6ZMB0 384 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 TTLL11Q8NHH1 800 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 OSBPL10Q9BXB5 764 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 RABL2BQ9UNT1 228 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 UMODL1Q5DID0 1318 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 AFDNP55196 1824 aaKnown RBP11.39□□□□□ -0.59
CAPN3-203ENST00000349748 hCG_1642624A0A1W2PR95 340 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 ADCY3O60266 1144 aa11.39□□□□□ -0.59
CAPN3-203ENST00000349748 STK10O94804 968 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms