RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PPP2R5AQ15172 486 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 GRIPAP1Q4V328 841 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 AGBL2Q5U5Z8 902 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 IL31RAQ8NI17 732 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 FAM84AQ96KN4 292 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 PAGR1Q9BTK6 254 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 WDR11Q9BZH6 1224 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 GPRC5CQ9NQ84 441 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 SERPINA10Q9UK55 444 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 PTPN22Q9Y2R2 807 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 LRRC37AA6NMS7 1700 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 ANKRD63C9JTQ0 380 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 DNM1LO00429 736 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 FSBPO95073 299 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 VIL1P09327 827 aaKnown RBP19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 CHRNA5P30532 468 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 SLC29A2Q14542 456 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 MICALCLQ6ZW33 695 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 CNPY4Q8N129 248 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 NLGN1Q8N2Q7 840 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 SEC16BQ96JE7 1060 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 AGBL1Q96MI9 1066 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 PSMD1Q99460 953 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 POP1Q99575 1024 aaKnown RBP19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 PYGMP11217 842 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 PDE6BP35913 854 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 PTGIRP43119 386 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 SLCO1A2P46721 670 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 RPL21P46778 160 aaKnown RBP19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 VAMP7P51809 220 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 MNAT1P51948 309 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 CCDC13Q8IYE1 715 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 RAB17Q9H0T7 212 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 GRHL1Q9NZI5 618 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 SEL1LQ9UBV2 794 aa19.53■□□□□ 0.72
PTP4A3-202ENST00000349124 CHRNB2P17787 502 aa19.52■□□□□ 0.72
PTP4A3-202ENST00000349124 PMS2P54278 862 aa19.52■□□□□ 0.72
PTP4A3-202ENST00000349124 COL20A1Q9P218 1284 aa19.52■□□□□ 0.72
PTP4A3-202ENST00000349124 SCN9AQ15858 1988 aa19.52■□□□□ 0.72
PTP4A3-202ENST00000349124 CYP26A1O43174 497 aa19.52■□□□□ 0.71
PTP4A3-202ENST00000349124 B3GNT9Q6UX72 402 aa19.52■□□□□ 0.71
PTP4A3-202ENST00000349124 NOP9Q86U38 636 aaKnown RBP19.52■□□□□ 0.71
PTP4A3-202ENST00000349124 SLC47A2Q86VL8 602 aa19.52■□□□□ 0.71
PTP4A3-202ENST00000349124 LDHDQ86WU2 507 aa19.52■□□□□ 0.71
PTP4A3-202ENST00000349124 TEKT3Q9BXF9 490 aa19.52■□□□□ 0.71
PTP4A3-202ENST00000349124 MTFR1LQ9H019 292 aa19.52■□□□□ 0.71
PTP4A3-202ENST00000349124 ODF2LQ9ULJ1 636 aa19.52■□□□□ 0.71
PTP4A3-202ENST00000349124 QSER1Q2KHR3 1735 aa19.52■□□□□ 0.71
PTP4A3-202ENST00000349124 ATP8B3O60423 1300 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 GOLGA6L10A0A0M3HER8 536 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 NSMFQ6X4W1 530 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 TLCD1Q96CP7 247 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 CABS1Q96KC9 395 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 TMX2Q9Y320 296 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 ANKRD31Q8N7Z5 1873 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 YDJCA8MPS7 323 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 BCRP11274 1271 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 FGFR4P22455 802 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 PEX5P50542 639 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 ACTN3Q08043 901 aaPredicted RBP19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 STXBP4Q6ZWJ1 553 aa19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 YTHDF3Q7Z739 585 aaKnown RBP19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 SPATS2Q86XZ4 545 aaKnown RBP19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 SUGP1Q8IWZ8 645 aaKnown RBP19.51■□□□□ 0.71
PTP4A3-202ENST00000349124 RPTORQ8N122 1335 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 MMEP08473 750 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 CCDC172P0C7W6 258 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 GPC5P78333 572 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 MAP2K1Q02750 393 aaPredicted RBP19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 SPP2Q13103 211 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 SEMA4DQ92854 862 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 CCDC127Q96BQ5 260 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 KREMEN1Q96MU8 473 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 PABPC3Q9H361 631 aaKnown RBP19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 AZI2Q9H6S1 392 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 KCNH7Q9NS40 1196 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 ZHX2Q9Y6X8 837 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 CC2D2BQ6DHV5 1058 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 CPLX4Q7Z7G2 160 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 PHLDB2Q86SQ0 1253 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 PPM1KQ8N3J5 372 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 SELENOSQ9BQE4 189 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 ZSWIM1Q9BR11 485 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 TMEM117Q9H0C3 514 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 ARHGEF10LQ9HCE6 1279 aa19.5■□□□□ 0.71
PTP4A3-202ENST00000349124 SLC16A4O15374 487 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 CTNND1O60716 968 aaKnown RBP19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 ENTPD3O75355 529 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 CHN1P15882 459 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 CCDC38Q502W7 563 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 EPC2Q52LR7 807 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 CCDC121Q6ZUS5 278 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 MIER3Q7Z3K6 550 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 SLC9A9Q8IVB4 645 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 KIFC3Q9BVG8 833 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 RANBP17Q9H2T7 1088 aaKnown RBP19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 ADAM7Q9H2U9 754 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 HSPBP1Q9NZL4 362 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 NFIBO00712 420 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 DRD4P21917 467 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms