RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PACS2Q86VP3 889 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 APOBEC3FQ8IUX4 373 aaKnown RBP15.05■□□□□ -0
TRIM4-201ENST00000349062 PLEKHO2Q8TD55 490 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 POLR3FQ9H1D9 316 aaPredicted RBP15.05■□□□□ -0
TRIM4-201ENST00000349062 MAP2K7O14733 419 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 EIF3DO15371 548 aaKnown RBP eCLIP15.05■□□□□ -0
TRIM4-201ENST00000349062 SOX5P35711 763 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 KRT76Q01546 638 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 NAB2Q15742 525 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 SNRNP35Q16560 246 aaKnown RBP15.05■□□□□ -0
TRIM4-201ENST00000349062 SUPT20HL1Q3ZLR7 823 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 CTNNBL1Q8WYA6 563 aaPredicted RBP15.05■□□□□ -0
TRIM4-201ENST00000349062 EPB41L5Q9HCM4 733 aa15.05■□□□□ -0
TRIM4-201ENST00000349062 F8VZ95 297 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 GUCY2CP25092 1073 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 SLC20A2Q08357 652 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 LY6KQ17RY6 165 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 CFAP221Q4G0U5 840 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 DDX42Q86XP3 938 aaKnown RBP eCLIP15.04■□□□□ -0
TRIM4-201ENST00000349062 THAP2Q9H0W7 228 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 AIPL1Q9NZN9 384 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 APEX2Q9UBZ4 518 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 GINS2Q9Y248 185 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 POLR2AP24928 1970 aaKnown RBP15.04■□□□□ -0
TRIM4-201ENST00000349062 POTEB2H3BUK9 544 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 TCP1P17987 556 aaKnown RBP15.04■□□□□ -0
TRIM4-201ENST00000349062 SSR1P43307 286 aaKnown RBP15.04■□□□□ -0
TRIM4-201ENST00000349062 LIG4P49917 911 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 GJC2Q5T442 439 aaPredicted RBP15.04■□□□□ -0
TRIM4-201ENST00000349062 ZFYVE27Q5T4F4 411 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 AADACL2Q6P093 401 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 OTUD6AQ7L8S5 288 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 LNX1Q8TBB1 728 aaPredicted RBP15.04■□□□□ -0
TRIM4-201ENST00000349062 AFAP1L1Q8TED9 768 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 IQCDQ96DY2 449 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 DDX47Q9H0S4 455 aaKnown RBP15.04■□□□□ -0
TRIM4-201ENST00000349062 NFU1Q9UMS0 254 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 MESDQ14696 234 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 GNPTABQ3T906 1256 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 SPOPLQ6IQ16 392 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 LRRC31Q6UY01 552 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 LRRC71Q8N4P6 559 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 ARHGEF26Q96DR7 871 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 HOXC10Q9NYD6 342 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 SEL1LQ9UBV2 794 aa15.04■□□□□ -0
TRIM4-201ENST00000349062 USP2O75604 605 aaPredicted RBP15.03■□□□□ -0
TRIM4-201ENST00000349062 SGPL1O95470 568 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 GJB1P08034 283 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 TMEM63BQ5T3F8 832 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 PASD1Q8IV76 773 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 RPUSD2Q8IZ73 545 aaKnown RBP15.03■□□□□ -0
TRIM4-201ENST00000349062 TAS1R2Q8TE23 839 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 TRAPPC12Q8WVT3 735 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 ATP6V0A1Q93050 837 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 IFT74Q96LB3 600 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 BTBD7Q9P203 1132 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 TBX20Q9UMR3 447 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 IGSF9BQ9UPX0 1349 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 ANO9A1A5B4 782 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 SLC16A3O15427 465 aaKnown RBP15.03■□□□□ -0
TRIM4-201ENST00000349062 HEXIM1O94992 359 aaKnown RBP15.03■□□□□ -0
TRIM4-201ENST00000349062 PSAPP07602 524 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 CCT5P48643 541 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 JAK3P52333 1124 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 MARSP56192 900 aaKnown RBP15.03■□□□□ -0
TRIM4-201ENST00000349062 BMT2Q1RMZ1 405 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 CATSPERGQ6ZRH7 1159 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 CPNE8Q86YQ8 564 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 ADGRA3Q8IWK6 1321 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 METTL13Q8N6R0 699 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 TATDN2Q93075 761 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 TMEM206Q9H813 350 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 SYNPO2Q9UMS6 1093 aa15.03■□□□□ -0
TRIM4-201ENST00000349062 PLA2G6O60733 806 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 FERP16591 822 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 TUBB2AQ13885 445 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 ZNF394Q53GI3 561 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 SLC47A2Q86VL8 602 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 SLC35G2Q8TBE7 412 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 TUBB2BQ9BVA1 445 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 DPH5Q9H2P9 285 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 LMNB1P20700 586 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 ADSSP30520 456 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 ZNF131P52739 623 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 STXBP2Q15833 593 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 LLGL2Q6P1M3 1020 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 PAXIP1Q6ZW49 1069 aaPredicted RBP15.02■□□□□ -0
TRIM4-201ENST00000349062 DHX37Q8IY37 1157 aaKnown RBP15.02■□□□□ -0
TRIM4-201ENST00000349062 SEMA4DQ92854 862 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 COPS5Q92905 334 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 FNBP1Q96RU3 617 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 SELENOOQ9BVL4 669 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 EDEM3Q9BZQ6 932 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 TMEM117Q9H0C3 514 aa15.02■□□□□ -0
TRIM4-201ENST00000349062 FTLP02792 175 aaPredicted RBP15.02□□□□□ -0.01
TRIM4-201ENST00000349062 ITGA4P13612 1032 aa15.02□□□□□ -0.01
TRIM4-201ENST00000349062 CARSP49589 748 aaKnown RBP15.02□□□□□ -0.01
TRIM4-201ENST00000349062 DRP2Q13474 957 aa15.02□□□□□ -0.01
TRIM4-201ENST00000349062 KCTD16Q68DU8 428 aa15.02□□□□□ -0.01
TRIM4-201ENST00000349062 INTS8Q75QN2 995 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms