RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 PCDHB6Q9Y5E3 794 aa14.77□□□□□ -0.05
CLCC1-202ENST00000348264 HIDE1A8MVS5 230 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 FXR2P51116 673 aaKnown RBP eCLIP14.76□□□□□ -0.05
CLCC1-202ENST00000348264 AFF1P51825 1210 aaKnown RBP14.76□□□□□ -0.05
CLCC1-202ENST00000348264 ZP2Q05996 745 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 POU5F1BQ06416 359 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 SMAD2Q15796 467 aaKnown RBP14.76□□□□□ -0.05
CLCC1-202ENST00000348264 ECM1Q16610 540 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 DUSP6Q16828 381 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 PDE12Q6L8Q7 609 aaKnown RBP14.76□□□□□ -0.05
CLCC1-202ENST00000348264 MAEAQ7L5Y9 396 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 MRPL10Q7Z7H8 261 aaKnown RBP14.76□□□□□ -0.05
CLCC1-202ENST00000348264 GJD3Q8N144 294 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 SMG8Q8ND04 991 aaKnown RBP14.76□□□□□ -0.05
CLCC1-202ENST00000348264 BCL7CQ8WUZ0 217 aaPredicted RBP14.76□□□□□ -0.05
CLCC1-202ENST00000348264 RSPH1Q8WYR4 309 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 NACC1Q96RE7 527 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 NFKBIZQ9BYH8 718 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 EPHX3Q9H6B9 360 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 NRDE2Q9H7Z3 1164 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 RSAD1Q9HA92 442 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 PUF60Q9UHX1 559 aaKnown RBP14.76□□□□□ -0.05
CLCC1-202ENST00000348264 FAM50BQ9Y247 325 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 KIF3AQ9Y496 699 aa14.76□□□□□ -0.05
CLCC1-202ENST00000348264 CNTNAP2Q9UHC6 1331 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 B4GALT5O43286 388 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 ARF4P18085 180 aaPredicted RBP14.75□□□□□ -0.05
CLCC1-202ENST00000348264 NCLP19338 710 aaKnown RBP14.75□□□□□ -0.05
CLCC1-202ENST00000348264 GJB2P29033 226 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 SSTR3P32745 418 aaPredicted RBP14.75□□□□□ -0.05
CLCC1-202ENST00000348264 CCT6AP40227 531 aaKnown RBP14.75□□□□□ -0.05
CLCC1-202ENST00000348264 ALDH7A1P49419 539 aaKnown RBP14.75□□□□□ -0.05
CLCC1-202ENST00000348264 KRT17Q04695 432 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 PTGDRQ13258 359 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 PCBP1Q15365 356 aaKnown RBP eCLIP14.75□□□□□ -0.05
CLCC1-202ENST00000348264 HAUS3Q68CZ6 603 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 NOTUMQ6P988 496 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 ZNF280BQ86YH2 543 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 SMRP1Q8NCR6 262 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 MCPH1Q8NEM0 835 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 BSNDQ8WZ55 320 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 PGBD4Q96DM1 585 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 GBP3Q9H0R5 595 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 DNAJB4Q9UDY4 337 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 IPPQ9Y573 584 aa14.75□□□□□ -0.05
CLCC1-202ENST00000348264 ARHGEF35A5YM69 484 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 LRRIQ4A6NIV6 560 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 EYA4O95677 639 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 GALTP07902 379 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 AXLP30530 894 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 SLC11A1P49279 550 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 RNASELQ05823 741 aaKnown RBP14.74□□□□□ -0.05
CLCC1-202ENST00000348264 COASYQ13057 564 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 CDCA2Q69YH5 1023 aaPredicted RBP14.74□□□□□ -0.05
CLCC1-202ENST00000348264 MCTP1Q6DN14 999 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 PADI6Q6TGC4 694 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 TMC7Q7Z402 723 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 CDR2LQ86X02 465 aaPredicted RBP14.74□□□□□ -0.05
CLCC1-202ENST00000348264 ADHFE1Q8IWW8 467 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 IGSF22Q8N9C0 903 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 URGCPQ8TCY9 931 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 CCDC51Q96ER9 411 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 TMEM169Q96HH4 297 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 IGSF21Q96ID5 467 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 CDCA3Q99618 268 aaPredicted RBP14.74□□□□□ -0.05
CLCC1-202ENST00000348264 CSRNP2Q9H175 543 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 NGRNQ9NPE2 291 aaKnown RBP14.74□□□□□ -0.05
CLCC1-202ENST00000348264 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.74□□□□□ -0.05
CLCC1-202ENST00000348264 LRWD1Q9UFC0 647 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 PRKAG3Q9UGI9 489 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 HES2Q9Y543 173 aa14.74□□□□□ -0.05
CLCC1-202ENST00000348264 PP2D1A8MPX8 630 aa14.73□□□□□ -0.05
CLCC1-202ENST00000348264 DDHD2O94830 711 aa14.73□□□□□ -0.05
CLCC1-202ENST00000348264 MUTP22033 750 aa14.73□□□□□ -0.05
CLCC1-202ENST00000348264 KCNC3Q14003 757 aa14.73□□□□□ -0.05
CLCC1-202ENST00000348264 SMC1AQ14683 1233 aaKnown RBP14.73□□□□□ -0.05
CLCC1-202ENST00000348264 IL17AQ16552 155 aa14.73□□□□□ -0.05
CLCC1-202ENST00000348264 SNX29Q8TEQ0 813 aa14.73□□□□□ -0.05
CLCC1-202ENST00000348264 VN1R3Q9BXE9 311 aa14.73□□□□□ -0.05
CLCC1-202ENST00000348264 ZBP1Q9H171 429 aa14.73□□□□□ -0.05
CLCC1-202ENST00000348264 NXF3Q9H4D5 531 aaKnown RBP14.73□□□□□ -0.05
CLCC1-202ENST00000348264 MYH11P35749 1972 aa14.73□□□□□ -0.05
CLCC1-202ENST00000348264 FSD2A1L4K1 749 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 C2orf71A6NGG8 1288 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 C19orf67A6NJJ6 358 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 TTLL13PA6NNM8 815 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 POMCP01189 267 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 ITGA4P13612 1032 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 CYP11B2P19099 503 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 MLH1P40692 756 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 PRPHP41219 470 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 MCM2P49736 904 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 PDIA5Q14554 519 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 LLGL2Q6P1M3 1020 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 PPP4R3CPQ6ZMV5 832 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 VPS52Q8N1B4 723 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 CNNM3Q8NE01 707 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 AUTS2Q8WXX7 1259 aa14.72□□□□□ -0.05
CLCC1-202ENST00000348264 ZFP42Q96MM3 310 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms