RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ABCA8O94911 1581 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 GLG1Q92896 1179 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 GOLGA8CPA6NN73 597 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 CALB1P05937 261 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 CTTNQ14247 550 aaKnown RBP19.2■□□□□ 0.66
SMC4-201ENST00000344722 PIGOQ8TEQ8 1089 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 RNF25Q96BH1 459 aaPredicted RBP19.2■□□□□ 0.66
SMC4-201ENST00000344722 NSL1Q96IY1 281 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 CYP26B1Q9NR63 512 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 RTN2O75298 545 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 RPS6KA5O75582 802 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 SLC1A1P43005 524 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 XXYLT1Q8NBI6 393 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 MTBPQ96DY7 904 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 SERPINB12Q96P63 405 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 MED10Q9BTT4 135 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 NRBP2Q9NSY0 501 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 CHCHD3Q9NX63 227 aaKnown RBP19.2■□□□□ 0.66
SMC4-201ENST00000344722 SLC16A3O15427 465 aaKnown RBP19.2■□□□□ 0.66
SMC4-201ENST00000344722 KYNUQ16719 465 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 GCOM2Q9BZD3 368 aaPredicted RBP19.2■□□□□ 0.66
SMC4-201ENST00000344722 SEC31BQ9NQW1 1179 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 IP6K2Q9UHH9 426 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 ESRRBO95718 433 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 TAC1P20366 129 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 GALCP54803 685 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 KIF22Q14807 665 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 TMEM259Q4ZIN3 620 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 FOXR1Q6PIV2 292 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 BARGINQ6ZT62 677 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 DDX56Q9NY93 547 aaKnown RBP19.2■□□□□ 0.66
SMC4-201ENST00000344722 PSMC3IPQ9P2W1 217 aaPredicted RBP19.2■□□□□ 0.66
SMC4-201ENST00000344722 SATB2Q9UPW6 733 aa19.2■□□□□ 0.66
SMC4-201ENST00000344722 CLTCL1P53675 1640 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 SFI1A8K8P3 1242 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 KCNA4P22459 653 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 ALDH18A1P54886 795 aaKnown RBP19.19■□□□□ 0.66
SMC4-201ENST00000344722 MECOMQ03112 1051 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 SLC44A4Q53GD3 710 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 KLC3Q6P597 504 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 GOLGA8IPA6NC78 632 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 GOLGA8JA6NMD2 632 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 IL6STP40189 918 aaPredicted RBP19.19■□□□□ 0.66
SMC4-201ENST00000344722 GCLMP48507 274 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 ITKQ08881 620 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 CYTH1Q15438 398 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 ABCB5Q2M3G0 1257 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 ADA2Q9NZK5 511 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 S100BP04271 92 aaPredicted RBP19.19■□□□□ 0.66
SMC4-201ENST00000344722 SLC29A2Q14542 456 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 HP1BP3Q5SSJ5 553 aaPredicted RBP19.19■□□□□ 0.66
SMC4-201ENST00000344722 CYFIP1Q7L576 1253 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 HSPH1Q92598 858 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 PABPC3Q9H361 631 aaKnown RBP19.19■□□□□ 0.66
SMC4-201ENST00000344722 SYCE1LA8MT33 242 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 DSG1Q02413 1049 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 HIF1AQ16665 826 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 TRIM67Q6ZTA4 783 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 USP6NLQ92738 828 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 ZC4H2Q9NQZ6 224 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 SEPT9Q9UHD8 586 aaPredicted RBP19.19■□□□□ 0.66
SMC4-201ENST00000344722 LEMD3Q9Y2U8 911 aa19.19■□□□□ 0.66
SMC4-201ENST00000344722 ZNF233A6NK53 670 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 CDK17Q00537 523 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 MORF4L2Q15014 288 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 PALMDQ9NP74 551 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 ABCC3O15438 1527 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 PDXKO00764 312 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 PAX7P23759 505 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 TMED10P49755 219 aaKnown RBP19.18■□□□□ 0.66
SMC4-201ENST00000344722 RBM15Q96T37 977 aaKnown RBP eCLIP19.18■□□□□ 0.665e-67■■■■■ 212.6
SMC4-201ENST00000344722 KCNK16Q96T55 309 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 DDX20Q9UHI6 824 aaKnown RBP19.18■□□□□ 0.66
SMC4-201ENST00000344722 UNC13BO14795 1591 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 POTEAQ6S8J7 498 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 RSPH3Q86UC2 560 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 CCDC24Q8N4L8 307 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 FBXL13Q8NEE6 735 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 KANSL2Q9H9L4 492 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 SLC38A10Q9HBR0 1119 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 SEL1LQ9UBV2 794 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 CCPG1Q9ULG6 757 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 PCDHA6Q9UN73 950 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 HPSEQ9Y251 543 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 PCDHA8Q9Y5H6 950 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 ARSEP51690 589 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 TAF12Q16514 161 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 KIF19Q2TAC6 998 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 ACBD5Q5T8D3 534 aaPredicted RBP19.18■□□□□ 0.66
SMC4-201ENST00000344722 OR6B2Q6IFH4 312 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 IGDCC4Q8TDY8 1250 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 ADPGKQ9BRR6 497 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 CCDC134Q9H6E4 229 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 SCHIP1Q9P0W5 487 aaPredicted RBP19.18■□□□□ 0.66
SMC4-201ENST00000344722 GINS2Q9Y248 185 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 PRR36Q9H6K5 1346 aa19.18■□□□□ 0.66
SMC4-201ENST00000344722 GSG1L2A8MUP6 293 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 CDK8P49336 464 aa19.17■□□□□ 0.66
SMC4-201ENST00000344722 ZNF746Q6NUN9 644 aaPredicted RBP19.17■□□□□ 0.66
SMC4-201ENST00000344722 SUPT20HQ8NEM7 779 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms