RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 POLR3FQ9H1D9 316 aaPredicted RBP22.22■■□□□ 1.15
CEACAM3-201ENST00000344550 C2orf40Q9H1Z8 148 aa22.22■■□□□ 1.15
CEACAM3-201ENST00000344550 PCDHB6Q9Y5E3 794 aa22.22■■□□□ 1.15
CEACAM3-201ENST00000344550 USO1O60763 962 aaKnown RBP22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 EYA4O95677 639 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 SRGAP2BP0DMP2 458 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 CCT6AP40227 531 aaKnown RBP22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 BCAR1P56945 870 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 COASYQ13057 564 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 SMAD4Q13485 552 aaKnown RBP22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 AMHR2Q16671 573 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 FAM187BQ17R55 369 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 CDCA2Q69YH5 1023 aaPredicted RBP22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 POTEGQ6S5H5 508 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 PADI6Q6TGC4 694 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 TMEM184AQ6ZMB5 413 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 DTHD1Q6ZMT9 781 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 AGMOQ6ZNB7 445 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 TMEM169Q96HH4 297 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 RSAD1Q9HA92 442 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 TBC1D13Q9NVG8 400 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 HCSTQ9UBK5 93 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 ATG2AQ2TAZ0 1938 aa22.21■■□□□ 1.15
CEACAM3-201ENST00000344550 PLXNA4Q9HCM2 1894 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 A0A1B0GUA9 196 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 CD2BP2O95400 341 aaKnown RBP22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 NRIP1P48552 1158 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 ERVFC1P60507 584 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 RNASELQ05823 741 aaKnown RBP22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 GIT2Q14161 759 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 SMAD2Q15796 467 aaKnown RBP22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 DUSP6Q16828 381 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 KRT79Q5XKE5 535 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 ARL6IP4Q66PJ3 421 aaKnown RBP22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 MCTP1Q6DN14 999 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 EP400NLQ6ZTU2 488 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 ZBTB8OSQ8IWT0 167 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 KIFAP3Q92845 792 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 MSLNLQ96KJ4 702 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 NECAB3Q96P71 396 aaPredicted RBP22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 TMEM175Q9BSA9 504 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 IGFLR1Q9H665 355 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 PRMT7Q9NVM4 692 aaPredicted RBP22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 CD207Q9UJ71 328 aa22.2■■□□□ 1.14
CEACAM3-201ENST00000344550 SLC26A4O43511 780 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 NAMPTP43490 491 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 NDUFV1P49821 464 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 ATP2C1P98194 919 aaPredicted RBP22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 ADGRD2Q7Z7M1 963 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 LPPQ93052 612 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 POP1Q99575 1024 aaKnown RBP22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 TCF25Q9BQ70 676 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 C1QTNF1Q9BXJ1 281 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 FZD8Q9H461 694 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 ENTPD7Q9NQZ7 604 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 DNM3Q9UQ16 869 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 GIT1Q9Y2X7 761 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 IRAK3Q9Y616 596 aa22.19■■□□□ 1.14
CEACAM3-201ENST00000344550 PHLPP2Q6ZVD8 1323 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 TBX10O75333 385 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 BMP15O95972 392 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 GALTP07902 379 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 ITGA4P13612 1032 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 ARF4P18085 180 aaPredicted RBP22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 PDCP20941 246 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 EFNA5P52803 228 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 CUL4AQ13619 759 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 NBR1Q14596 966 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 SMC1AQ14683 1233 aaKnown RBP22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 LARP1BQ659C4 914 aaKnown RBP22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 SLC27A1Q6PCB7 646 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 TMC7Q7Z402 723 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 DDX53Q86TM3 631 aaKnown RBP22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 MRPL43Q8N983 215 aaKnown RBP22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 SNX29Q8TEQ0 813 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 IGSF21Q96ID5 467 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 NRDE2Q9H7Z3 1164 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 KCNG1Q9UIX4 513 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 KIAA1024Q9UPX6 916 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 IPPQ9Y573 584 aa22.18■■□□□ 1.14
CEACAM3-201ENST00000344550 LRRIQ4A6NIV6 560 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 MBTPS2O43462 519 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 ZC3H11AO75152 810 aaKnown RBP eCLIP22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 ALDH2P05091 517 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 IL9P15248 144 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 GTF2F1P35269 517 aaKnown RBP eCLIP22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 DLX2Q07687 328 aaPredicted RBP22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 KCNC3Q14003 757 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 MAPK6Q16659 721 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 BRAPQ7Z569 592 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 ADHFE1Q8IWW8 467 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 GJD3Q8N144 294 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 SMRP1Q8NCR6 262 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 SMG8Q8ND04 991 aaKnown RBP22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 IFT74Q96LB3 600 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 TIPINQ9BVW5 301 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 TRIM6Q9C030 488 aaPredicted RBP22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 BHMT2Q9H2M3 363 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 C17orf75Q9HAS0 396 aa22.17■■□□□ 1.14
CEACAM3-201ENST00000344550 CLEC1BQ9P126 229 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms