RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 DHX9Q08211 1270 aaKnown RBP13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 CRLF3Q8IUI8 442 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 RNF25Q96BH1 459 aaPredicted RBP13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 L3MBTL3Q96JM7 780 aaPredicted RBP13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 NHEJ1Q9H9Q4 299 aaPredicted RBP13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 MINPP1Q9UNW1 487 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 KDM5DQ9BY66 1539 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 PNMA6FA0A0J9YX94 578 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 RPS6KA4O75676 772 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 EIF4A3P38919 411 aaKnown RBP13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 TMPRSS15P98073 1019 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 GRAMD4Q6IC98 578 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 MFN1Q8IWA4 741 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 TTLL11Q8NHH1 800 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 NBNO60934 754 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 TCP1P17987 556 aaKnown RBP13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 CASP1P29466 404 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 SNAPC2Q13487 334 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 MDH1BQ5I0G3 518 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 LRRC8AQ8IWT6 810 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 DHX35Q9H5Z1 703 aaKnown RBP13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 PIH1D3Q9NQM4 214 aaKnown RBP13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 RNF123Q5XPI4 1314 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 KDM5CP41229 1560 aa13.01□□□□□ -0.33
TRIOBP-202ENST00000344404 CARMIL3Q8ND23 1372 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 MAN1A2O60476 641 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 ZNF746Q6NUN9 644 aaPredicted RBP13□□□□□ -0.33
TRIOBP-202ENST00000344404 YME1L1Q96TA2 773 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 NLRP1Q9C000 1473 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 ARHGEF9O43307 516 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 PFKFB2O60825 505 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 LUC7L3O95232 432 aaKnown RBP13□□□□□ -0.33
TRIOBP-202ENST00000344404 CYBBP04839 570 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 ZNF235Q14590 738 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 MEI1Q5TIA1 1274 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 C10orf53Q8N6V4 93 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 CCDC51Q96ER9 411 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 GCOM2Q9BZD3 368 aaPredicted RBP13□□□□□ -0.33
TRIOBP-202ENST00000344404 PDGFRBP09619 1106 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 KCNA2P16389 499 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 SREBF2Q12772 1141 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 ALFQ53S48 1182 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 ARMC6Q6NXE6 501 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 GTF2A1LQ9UNN4 478 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 STX19Q8N4C7 294 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 ATP11CQ8NB49 1132 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 CD209Q9NNX6 404 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 SNX5Q9Y5X3 404 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 POTEMA6NI47 508 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 SKIP12755 728 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 RASGRF1Q13972 1273 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 KIZQ2M2Z5 673 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 IL31Q6EBC2 164 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 CENPKQ9BS16 269 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 POLR3FQ9H1D9 316 aaPredicted RBP13□□□□□ -0.33
TRIOBP-202ENST00000344404 DBNLQ9UJU6 430 aaKnown RBP13□□□□□ -0.33
TRIOBP-202ENST00000344404 BSDC1Q9NW68 430 aaPredicted RBP13□□□□□ -0.33
TRIOBP-202ENST00000344404 ADAM22Q9P0K1 906 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 PCDHB6Q9Y5E3 794 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 PCDHA13Q9Y5I0 950 aa13□□□□□ -0.33
TRIOBP-202ENST00000344404 ADGRL3Q9HAR2 1447 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 MEFVO15553 781 aaPredicted RBP12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 SLFN14P0C7P3 912 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 PDXDC1Q6P996 788 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 LRRC37BQ96QE4 947 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 NOVA2Q9UNW9 492 aaKnown RBP12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 IQANK1A0A1B0GTG1 560 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 PSMD14O00487 310 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 RALAP11233 206 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 SLC16A1P53985 500 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 EFTUD2Q15029 972 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■■■■□ 22.1
TRIOBP-202ENST00000344404 FASTKD1Q53R41 847 aaKnown RBP12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 APPL2Q8NEU8 664 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 OTUB1Q96FW1 271 aaPredicted RBP12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 KIFC3Q9BVG8 833 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 KRT7P08729 469 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 CMA1P23946 247 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 COPS2P61201 443 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 DR1Q01658 176 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 SURF1Q15526 300 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 ZNF658Q5TYW1 1059 aaPredicted RBP12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 CENPUQ71F23 418 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 LMBRD1Q9NUN5 540 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 PPARGC1AQ9UBK2 798 aaKnown RBP12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 PCDHGB4Q9UN71 923 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 CTNND1O60716 968 aaKnown RBP12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 TJP3O95049 919 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 DPEP1P16444 411 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 CEP95Q96GE4 821 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 GNASQ5JWF2 1037 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 CACUL1Q86Y37 369 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 EFHBQ8N7U6 833 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 CCHCR1Q8TD31 782 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 UNC45AQ9H3U1 944 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 ADGRA2Q96PE1 1338 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 PTPRKQ15262 1439 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 CA4P22748 312 aa12.99□□□□□ -0.33
TRIOBP-202ENST00000344404 ATXN3P54252 364 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms