RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 RIPK3Q9Y572 518 aa23.17■■□□□ 1.3
CCDC38-201ENST00000344280 TESPA1A2RU30 521 aaPredicted RBP23.16■■□□□ 1.3
CCDC38-201ENST00000344280 SOX10P56693 466 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 ZNF211Q13398 564 aaPredicted RBP23.16■■□□□ 1.3
CCDC38-201ENST00000344280 PRPF4BQ13523 1007 aaKnown RBP23.16■■□□□ 1.3
CCDC38-201ENST00000344280 NSMFQ6X4W1 530 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 CBWD2Q8IUF1 395 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 C12orf56Q8IXR9 622 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 ALG3Q92685 438 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 ELMO3Q96BJ8 720 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 RRP15Q9Y3B9 282 aaKnown RBP23.16■■□□□ 1.3
CCDC38-201ENST00000344280 ANKRD63C9JTQ0 380 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 CCDC188H7C350 402 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 DAPK3O43293 454 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 PPFIA4O75335 1185 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 USP8P40818 1118 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 ATP1A2P50993 1020 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 IRX5P78411 483 aaPredicted RBP23.16■■□□□ 1.3
CCDC38-201ENST00000344280 ALCAMQ13740 583 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 XKR9Q5GH70 373 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 CIAPIN1Q6FI81 312 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 C4orf19Q8IY42 314 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 TMEM174Q8WUU8 243 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 SAAL1Q96ER3 474 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 RPAP3Q9H6T3 665 aaPredicted RBP23.16■■□□□ 1.3
CCDC38-201ENST00000344280 PXMP2Q9NR77 195 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 PLAAQ9Y263 795 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 TELO2Q9Y4R8 837 aa23.16■■□□□ 1.3
CCDC38-201ENST00000344280 TRIM66O15016 1216 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 FTLP02792 175 aaPredicted RBP23.15■■□□□ 1.3
CCDC38-201ENST00000344280 RFX1P22670 979 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 GNGT1P63211 74 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 UAP1Q16222 522 aaPredicted RBP23.15■■□□□ 1.3
CCDC38-201ENST00000344280 AADACL2Q6P093 401 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 RPUSD2Q8IZ73 545 aaKnown RBP23.15■■□□□ 1.3
CCDC38-201ENST00000344280 PCDHB18PQ96TA0 734 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 POP1Q99575 1024 aaKnown RBP23.15■■□□□ 1.3
CCDC38-201ENST00000344280 TMOD4Q9NZQ9 345 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 ANKRD65E5RJM6 399 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 SGPL1O95470 568 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 HSD17B3P37058 310 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 NCKAP1LP55160 1127 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 PSMC5P62195 406 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 POU5F1Q01860 360 aaKnown RBP23.15■■□□□ 1.3
CCDC38-201ENST00000344280 MAP2K1Q02750 393 aaPredicted RBP23.15■■□□□ 1.3
CCDC38-201ENST00000344280 CUL1Q13616 776 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 RNF207Q6ZRF8 634 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 ANO5Q75V66 913 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 OR2W6PQ8NHA6 318 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 SEMA4DQ92854 862 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 ERVK-5Q9HDB9 667 aa23.15■■□□□ 1.3
CCDC38-201ENST00000344280 MYO1CO00159 1063 aa23.14■■□□□ 1.29
CCDC38-201ENST00000344280 MXI1P50539 228 aa23.14■■□□□ 1.29
CCDC38-201ENST00000344280 ATG4CQ96DT6 458 aa23.14■■□□□ 1.29
CCDC38-201ENST00000344280 RNPC3Q96LT9 517 aaKnown RBP23.14■■□□□ 1.29
CCDC38-201ENST00000344280 KREMEN1Q96MU8 473 aa23.14■■□□□ 1.29
CCDC38-201ENST00000344280 ST6GALNAC4Q9H4F1 302 aa23.14■■□□□ 1.29
CCDC38-201ENST00000344280 CCDC169A6NNP5 214 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 CETN1Q12798 172 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 CD302Q8IX05 232 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 CCDC127Q96BQ5 260 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 TRIM51Q9BSJ1 452 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 ALG6Q9Y672 507 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 CHRNB2P17787 502 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 PDCLQ13371 301 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 ARHGEF16Q5VV41 709 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 MAATS1Q7Z4T9 603 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 NOP9Q86U38 636 aaKnown RBP23.13■■□□□ 1.29
CCDC38-201ENST00000344280 TMEM161BQ8NDZ6 487 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 BSNDQ8WZ55 320 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 SLITRK6Q9H5Y7 841 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 TTC7AQ9ULT0 858 aaPredicted RBP23.13■■□□□ 1.29
CCDC38-201ENST00000344280 FZD1Q9UP38 647 aa23.13■■□□□ 1.29
CCDC38-201ENST00000344280 WDR64B1ANS9 1081 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 EIF3HO15372 352 aaKnown RBP eCLIP23.12■■□□□ 1.29
CCDC38-201ENST00000344280 P4HA2O15460 535 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 ATMINO43313 823 aaPredicted RBP23.12■■□□□ 1.29
CCDC38-201ENST00000344280 NPTX2P47972 431 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 MARCKSL1P49006 195 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 SKOR1P84550 965 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 BAATQ14032 418 aaPredicted RBP23.12■■□□□ 1.29
CCDC38-201ENST00000344280 SNRNP35Q16560 246 aaKnown RBP23.12■■□□□ 1.29
CCDC38-201ENST00000344280 CEP85LQ5SZL2 805 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 SAMD7Q7Z3H4 446 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 SLC47A2Q86VL8 602 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 FMNL3Q8IVF7 1028 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 EIF1ADQ8N9N8 165 aaKnown RBP23.12■■□□□ 1.29
CCDC38-201ENST00000344280 VPS33BQ9H267 617 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 DPH5Q9H2P9 285 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 TOPORSQ9NS56 1045 aaPredicted RBP23.12■■□□□ 1.29
CCDC38-201ENST00000344280 CTTNBP2NLQ9P2B4 639 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 TBX20Q9UMR3 447 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 VWA5AO00534 786 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 CTNND1O60716 968 aaKnown RBP23.12■■□□□ 1.29
CCDC38-201ENST00000344280 CLSTN1O94985 981 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 PPM1KQ8N3J5 372 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 EPS8L1Q8TE68 723 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 KRT35Q92764 455 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 FAM84AQ96KN4 292 aa23.12■■□□□ 1.29
CCDC38-201ENST00000344280 TRIM31Q9BZY9 425 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms