RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 NBPF12Q5TAG4 269 aaPredicted RBP16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 RPUSD2Q8IZ73 545 aaKnown RBP16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 PPM1KQ8N3J5 372 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 POP1Q99575 1024 aaKnown RBP16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 RSPH14Q9UHP6 348 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 GJA3Q9Y6H8 435 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 ZNF233A6NK53 670 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 ANKRD63C9JTQ0 380 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 ALCAMQ13740 583 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 TNFAIP1Q13829 316 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 DCAF12L1Q5VU92 463 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 MAATS1Q7Z4T9 603 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 ZKSCAN4Q969J2 545 aaPredicted RBP16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 TRIM31Q9BZY9 425 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 TMEM117Q9H0C3 514 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 RNF146Q9NTX7 359 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 TMOD4Q9NZQ9 345 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 PIM2Q9P1W9 311 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 LCMT1Q9UIC8 334 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 NR2E1Q9Y466 385 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 TELO2Q9Y4R8 837 aa16.11■□□□□ 0.17
VIPAS39-202ENST00000343765 TTI1O43156 1089 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 ATMINO43313 823 aaPredicted RBP16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 IVLP07476 585 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 GTF2BQ00403 316 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 PPARDQ03181 441 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 EPC2Q52LR7 807 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 PIK3R5Q8WYR1 880 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 FAM84AQ96KN4 292 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 TOPORSQ9NS56 1045 aaPredicted RBP16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 CTTNBP2NLQ9P2B4 639 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 VWA5AO00534 786 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 SGPL1O95470 568 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 FTLP02792 175 aaPredicted RBP16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 ATP1A2P50993 1020 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 MYBPC2Q14324 1141 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 ANO5Q75V66 913 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 MICALL2Q8IY33 904 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 C4orf19Q8IY42 314 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 WHAMMQ8TF30 809 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 ISCUQ9H1K1 167 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 NEUROG2Q9H2A3 272 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 DPH5Q9H2P9 285 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 CENPHQ9H3R5 247 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 HACL1Q9UJ83 578 aa16.1■□□□□ 0.17
VIPAS39-202ENST00000343765 ANKRD62A6NC57 917 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 DAPK3O43293 454 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 MAPTP10636 758 aaKnown RBP16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 ADSSP30520 456 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 PPATQ06203 517 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 SNRNP35Q16560 246 aaKnown RBP16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 AADACL2Q6P093 401 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 IQCKQ8N0W5 287 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 RASGEF1CQ8N431 466 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 CALR3Q96L12 384 aaKnown RBP16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 ATP8B3O60423 1300 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 DENND3A2RUS2 1198 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 DDX3YO15523 660 aaKnown RBP16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 LYPLA2O95372 231 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 ECHS1P30084 290 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 NPTX2P47972 431 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 DMP1Q13316 513 aaPredicted RBP16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 NLRX1Q86UT6 975 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 BSNDQ8WZ55 320 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 RNPC3Q96LT9 517 aaKnown RBP16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 CAPS2Q9BXY5 557 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 GABBR1Q9UBS5 961 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 PLAAQ9Y263 795 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 CYP26A1O43174 497 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 GMPSP49915 693 aaPredicted RBP16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 JAK3P52333 1124 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 GNGT1P63211 74 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 SNRNP48Q6IEG0 339 aaKnown RBP16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 OR2W6PQ8NHA6 318 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 SEMA4DQ92854 862 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 CEP170P1Q96L14 293 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 TRIM51Q9BSJ1 452 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 TBX20Q9UMR3 447 aa16.09■□□□□ 0.17
VIPAS39-202ENST00000343765 ANKRD65E5RJM6 399 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 RPS6KA5O75582 802 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 RFX1P22670 979 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 FLT3P36888 993 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 NCKAP1LP55160 1127 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 KRT76Q01546 638 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 GHRHRQ02643 423 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 DALRD3Q5D0E6 543 aaKnown RBP16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 SLC47A2Q86VL8 602 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 FMNL3Q8IVF7 1028 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 TMEM161BQ8NDZ6 487 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 ALG3Q92685 438 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 VPS33BQ9H267 617 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 KMT5AQ9NQR1 393 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 CCDC188H7C350 402 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 CNGA1P29973 690 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 IRAK1P51617 712 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 SMTNP53814 917 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 HMGCS2P54868 508 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 CEP85LQ5SZL2 805 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 NOP9Q86U38 636 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms