RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 UBE4AQ14139 1066 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 RFX8Q6ZV50 586 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 PHC3Q8NDX5 983 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 CEP95Q96GE4 821 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 PLCH1Q4KWH8 1693 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 NR3C1P04150 777 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 FERP16591 822 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 HOXD13P35453 343 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 PDIA5Q14554 519 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 CCDC6Q16204 474 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 NSMFQ6X4W1 530 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 SLC30A10Q6XR72 485 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 NKIRAS1Q9NYS0 192 aa15.97■□□□□ 0.15
CLCN1-201ENST00000343257 CNOT7Q9UIV1 285 aaKnown RBP15.97■□□□□ 0.15
CLCN1-201ENST00000343257 PYGLP06737 847 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 RRP1BQ14684 758 aaKnown RBP15.96■□□□□ 0.15
CLCN1-201ENST00000343257 SETDB1Q15047 1291 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 APBB1IPQ7Z5R6 666 aaPredicted RBP15.96■□□□□ 0.15
CLCN1-201ENST00000343257 DTX3LQ8TDB6 740 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 STK32AQ8WU08 396 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 DNAJC9Q8WXX5 260 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 ATG4AQ8WYN0 398 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 SPZ1Q9BXG8 430 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 NT5C3AQ9H0P0 336 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 COMTP21964 271 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 KNOP1Q1ED39 458 aaKnown RBP15.96■□□□□ 0.15
CLCN1-201ENST00000343257 SEL1L2Q5TEA6 688 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 KIAA0825Q8IV33 1275 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 SLC35C1Q96A29 364 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 C9orf72Q96LT7 481 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 GPR101Q96P66 508 aaPredicted RBP15.96■□□□□ 0.15
CLCN1-201ENST00000343257 TBC1D10AQ9BXI6 508 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 TRIM4Q9C037 500 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 TAOK3Q9H2K8 898 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 CYP39A1Q9NYL5 469 aa15.96■□□□□ 0.15
CLCN1-201ENST00000343257 A0A0A6YYK5 440 aaPredicted RBP15.95■□□□□ 0.14
CLCN1-201ENST00000343257 A0A1W2PRG0 241 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 ANKRD33BA6NCL7 494 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 TOM1O60784 492 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 CHRNA3P32297 505 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 SOX5P35711 763 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 RANBP1P43487 201 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 RBM5P52756 815 aaKnown RBP eCLIP15.95■□□□□ 0.14
CLCN1-201ENST00000343257 MARSP56192 900 aaKnown RBP15.95■□□□□ 0.14
CLCN1-201ENST00000343257 TMED2Q15363 201 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 PHLDB2Q86SQ0 1253 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 ACP6Q9NPH0 428 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 PRKAG3Q9UGI9 489 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 SUGT1Q9Y2Z0 365 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 TRPM3Q9HCF6 1732 aaPredicted RBP15.95■□□□□ 0.14
CLCN1-201ENST00000343257 USP17L15C9J2P7 530 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 USP17L13C9JLJ4 530 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 USP17L11C9JVI0 530 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 USP17L18D6R9N7 530 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 USP17L22D6RA61 530 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 USP17L17D6RBQ6 530 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 USP17L19D6RCP7 530 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 USP17L20D6RJB6 530 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 THAP12O43422 761 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 NTSR2O95665 410 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 TMEM253P0C7T8 217 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 IL6STP40189 918 aaPredicted RBP15.95■□□□□ 0.14
CLCN1-201ENST00000343257 JAM2P57087 298 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 KLC1Q07866 573 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 USP17L24Q0WX57 530 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 COG2Q14746 738 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 RFWD3Q6PCD5 774 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 USP17L6PQ6QN14 398 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 CHKBQ9Y259 395 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 ALS2Q96Q42 1657 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 CACNA1SQ13698 1873 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 LIN7AO14910 233 aaPredicted RBP15.95■□□□□ 0.14
CLCN1-201ENST00000343257 SP100P23497 879 aaPredicted RBP15.95■□□□□ 0.14
CLCN1-201ENST00000343257 COILP38432 576 aaPredicted RBP15.95■□□□□ 0.14
CLCN1-201ENST00000343257 CYP2J2P51589 502 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 RCN2Q14257 317 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 TTBK2Q6IQ55 1244 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 CYP4F22Q6NT55 531 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 FRMD5Q7Z6J6 570 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 DDX50Q9BQ39 737 aaKnown RBP15.95■□□□□ 0.14
CLCN1-201ENST00000343257 REEP2Q9BRK0 252 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 DENND2DQ9H6A0 471 aaPredicted RBP15.95■□□□□ 0.14
CLCN1-201ENST00000343257 TXLNGQ9NUQ3 528 aa15.95■□□□□ 0.14
CLCN1-201ENST00000343257 SPOPO43791 374 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 FTLP02792 175 aaPredicted RBP15.94■□□□□ 0.14
CLCN1-201ENST00000343257 TAC1P20366 129 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 LMNB1P20700 586 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 ATP6V1C1P21283 382 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 LAMB3Q13751 1172 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 SPDYCQ5MJ68 293 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 BTNL9Q6UXG8 535 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 TEX9Q8N6V9 391 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 UBL4BQ8N7F7 174 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 TTC7AQ9ULT0 858 aaPredicted RBP15.94■□□□□ 0.14
CLCN1-201ENST00000343257 NENFQ9UMX5 172 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 LRRC42Q9Y546 428 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 GSTTP1A0A1W2PQM5 241 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 CLDN3O15551 220 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 CHRNB2P17787 502 aa15.94■□□□□ 0.14
CLCN1-201ENST00000343257 CDK8P49336 464 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms