RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 AHCTF1Q8WYP5 2266 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 SPDYE16A6NNV3 312 aaPredicted RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 PIK3CAP42336 1068 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 PRAMEP78395 509 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 TRADDQ15628 312 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 EXOC3L4Q17RC7 722 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 SPDYE2Q495Y8 402 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 HERC4Q5GLZ8 1057 aaPredicted RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 VSTM4Q8IW00 320 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 PGBD1Q96JS3 809 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 RUBCNLQ9H714 662 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 IMPAD1Q9NX62 359 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 ADGRL1O94910 1474 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 ARAP1Q96P48 1450 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 H0YCG3 227 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 MDH1P40925 334 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 MAPRE1Q15691 268 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 RASSF6Q6ZTQ3 369 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 SYTL5Q8TDW5 730 aaPredicted RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 BPIFA3Q9BQP9 254 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 METTL14Q9HCE5 456 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 DMAP1Q9NPF5 467 aaPredicted RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 MBIPQ9NS73 344 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 INTS13Q9NVM9 706 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 STK17AQ9UEE5 414 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 TDRD15B5MCY1 1934 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 LIN7AO14910 233 aaPredicted RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 SGSM2O43147 1006 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 ENO1P06733 434 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 TNNI1P19237 187 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 CCDC157Q569K6 752 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 APOA5Q6Q788 366 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 ANKRD44Q8N8A2 993 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 GRPEL2Q8TAA5 225 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 CD248Q9HCU0 757 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 ANAPC7Q9UJX3 599 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 ARFIP2P53365 341 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 C1DQ13901 141 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 LRRC8DQ7L1W4 858 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 KRT27Q7Z3Y8 459 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 SZRD1Q7Z422 152 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 BEST2Q8NFU1 509 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 BTN2A2Q8WVV5 523 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 REXO4Q9GZR2 422 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 NOL6Q9H6R4 1146 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 MAST1Q9Y2H9 1570 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 SFI1A8K8P3 1242 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 ANKRD65E5RJM6 399 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 MOCS3O95396 460 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 PFKFB1P16118 471 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 MAPKAPK2P49137 400 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 ALDH18A1P54886 795 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 PKN2Q16513 984 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 HABP4Q5JVS0 413 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 PRUNE1Q86TP1 453 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 PCYOX1LQ8NBM8 494 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 AZI2Q9H6S1 392 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 JMJD4Q9H9V9 463 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 ING3Q9NXR8 418 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 SELENONQ9NZV5 590 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 TRMT6Q9UJA5 497 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 BAIAP2Q9UQB8 552 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 SNAPC4Q5SXM2 1469 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 H7C0C1 242 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 SKAP2O75563 359 aaPredicted RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 PPP1R37O75864 691 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 H2AFZP0C0S5 128 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 GSTT1P30711 240 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 MAPK4P31152 587 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 ATP5OP48047 213 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 H2AFVQ71UI9 128 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 NME9Q86XW9 330 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 RBBP8NLQ8NC74 664 aaPredicted RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 C18orf25Q96B23 403 aaPredicted RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 GCOM2Q9BZD3 368 aaPredicted RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 TBC1D7Q9P0N9 293 aa6.52□□□□□ -1.37
VCAN-203ENST00000343200 MTO1Q9Y2Z2 717 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 FAM32AQ9Y421 112 aaKnown RBP6.52□□□□□ -1.37
VCAN-203ENST00000343200 SF3B1O75533 1304 aaKnown RBP eCLIP6.51□□□□□ -1.37
VCAN-203ENST00000343200 ZNF806P0C7X5 589 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 EIF2S3P41091 472 aaKnown RBP6.51□□□□□ -1.37
VCAN-203ENST00000343200 ITKQ08881 620 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 SEMA3FQ13275 785 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 RHPN1Q8TCX5 695 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 VPS50Q96JG6 964 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 ZNF184Q99676 751 aaPredicted RBP6.51□□□□□ -1.37
VCAN-203ENST00000343200 MRPL47Q9HD33 250 aaKnown RBP6.51□□□□□ -1.37
VCAN-203ENST00000343200 ZFYVE9O95405 1425 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 CASP8AP2Q9UKL3 1982 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 TRIM49BA6NDI0 452 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 FAM47DPA6NHR8 397 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 TRIM49D1C9J1S8 452 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 ZNF862O60290 1169 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 TNFRSF21O75509 655 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 PIK3R1P27986 724 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 BTKQ06187 659 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 GATAD2AQ86YP4 633 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 MYOCDQ8IZQ8 938 aa6.51□□□□□ -1.37
VCAN-203ENST00000343200 ZNF473Q8WTR7 871 aaKnown RBP6.51□□□□□ -1.37
VCAN-203ENST00000343200 CCDC85AQ96PX6 553 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms