RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 RPF1Q9H9Y2 349 aaKnown RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 EHD2Q9NZN4 543 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 GABBR1Q9UBS5 961 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 PALM3A6NDB9 673 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 MYBP10242 640 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 RASA1P20936 1047 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 FGFR4P22455 802 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 CTCFP49711 727 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ASPHQ12797 758 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 LAMB3Q13751 1172 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 PREPLQ4J6C6 727 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 SNRNP48Q6IEG0 339 aaKnown RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 KCNB2Q92953 911 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ZNF512BQ96KM6 892 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 FAM81BQ96LP2 452 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 C7orf25Q9BPX7 421 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 REEP2Q9BRK0 252 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 TRIM51Q9BSJ1 452 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 PCSK1NQ9UHG2 260 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ADGRB1O14514 1584 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ADAMTS13Q76LX8 1427 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 WDR64B1ANS9 1081 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 CYP26A1O43174 497 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ANP32DO95626 131 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 NTSR2O95665 410 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ZBED1O96006 694 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 SLC4A1P02730 911 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 NT5C2P49902 561 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 JAK3P52333 1124 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ITPK1Q13572 414 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 MMEL1Q495T6 779 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 CCDC137Q6PK04 289 aaKnown RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 PDIK1LQ8N165 341 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 LINC00116Q8NCU8 138 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 OR2W6PQ8NHA6 318 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 RBM12Q9NTZ6 932 aaKnown RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 DIP2AQ14689 1571 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 GRID2IPA4D2P6 1211 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 CLDN3O15551 220 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 PLEKP08567 350 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 QARSP47897 775 aaKnown RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ZNF543Q08ER8 600 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 TTLL6Q8N841 843 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 TBC1D16Q8TBP0 767 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 FAF2Q96CS3 445 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 DTNBP1Q96EV8 351 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 RPS6KC1Q96S38 1066 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 MAP3K14Q99558 947 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 FAM49AQ9H0Q0 323 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ZNF277Q9NRM2 450 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 KLHL11Q9NVR0 708 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 DIS3Q9Y2L1 958 aaKnown RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ZHX2Q9Y6X8 837 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ITIH6Q6UXX5 1313 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 TJP3O95049 919 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 P4HBP07237 508 aaKnown RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 SLC9A1P19634 815 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ARL4AP40617 200 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 TOB1P50616 345 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 USP11P51784 963 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 SPOUT1Q5T280 376 aaKnown RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 TMEM154Q6P9G4 183 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 TMED8Q6PL24 325 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 KDM7AQ6ZMT4 941 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 PODNQ7Z5L7 613 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 DEPDC1BQ8WUY9 529 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 FEM1BQ9UK73 627 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 HEY1Q9Y5J3 304 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 SCINQ9Y6U3 715 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 TTI1O43156 1089 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 CAND2O75155 1236 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 CCND1P24385 295 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 SCTRP47872 440 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ORC2Q13416 577 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 PDIA5Q14554 519 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 ZC2HC1CQ53FD0 456 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 PCGF5Q86SE9 256 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 TRIM59Q8IWR1 403 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 GIMAP8Q8ND71 665 aaPredicted RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 SLC30A5Q8TAD4 765 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 HDAC11Q96DB2 347 aa8.6□□□□□ -1.03
UBE4B-202ENST00000343090 FNDC3AQ9Y2H6 1198 aaKnown RBP8.6□□□□□ -1.03
UBE4B-202ENST00000343090 FSBPO95073 299 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 NCF2P19878 526 aaPredicted RBP8.59□□□□□ -1.03
UBE4B-202ENST00000343090 SBK1Q52WX2 424 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 C4orf50Q6ZRC1 276 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 TEX9Q8N6V9 391 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 RFFLQ8WZ73 363 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 RUBCNQ92622 972 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 ETNK1Q9HBU6 452 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 RNF146Q9NTX7 359 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 SCAF8Q9UPN6 1271 aaKnown RBP8.59□□□□□ -1.03
UBE4B-202ENST00000343090 PSMD14O00487 310 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 SPAG7O75391 227 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 GPC4O75487 556 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 GNAT1P11488 350 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 SPP2Q13103 211 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 KIF22Q14807 665 aa8.59□□□□□ -1.03
UBE4B-202ENST00000343090 SF3B3Q15393 1217 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms