RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CCNYL1Q8N7R7 359 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 LRRC39Q96DD0 335 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 OSBPP22059 807 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 GPIHBP1Q8IV16 184 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 KIAA1024Q9UPX6 916 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 TLR2O60603 784 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 ITGA6P23229 1130 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 PUDPQ08623 228 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 SYTL3Q4VX76 610 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 DYRK3O43781 588 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 IL2RBP14784 551 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 PMF1Q6P1K2 205 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 ZNF577Q9BSK1 485 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 BCL2L14Q9BZR8 327 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 CYP4F11Q9HBI6 524 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 C17orf53Q8N3J3 647 aaPredicted RBP18.63■□□□□ 0.57
SMAD4-201ENST00000342988 NCOA5Q9HCD5 579 aaKnown RBP18.63■□□□□ 0.57
SMAD4-201ENST00000342988 PALD1Q9ULE6 856 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 ZFYVE9O95405 1425 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 IGHDP01880 384 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 SERHL2Q9H4I8 314 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 SERHLQ9NQF3 203 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 MEFVO15553 781 aaPredicted RBP18.63■□□□□ 0.57
SMAD4-201ENST00000342988 SESN2P58004 480 aaPredicted RBP18.63■□□□□ 0.57
SMAD4-201ENST00000342988 COG2Q14746 738 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 ANKS6Q68DC2 871 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 SLC35F6Q8N357 371 aa18.63■□□□□ 0.57
SMAD4-201ENST00000342988 DCPSQ96C86 337 aaKnown RBP18.63■□□□□ 0.57
SMAD4-201ENST00000342988 GMNCA6NCL1 334 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 NUP107P57740 925 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 ZBED8Q8IZ13 594 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 CFAP99D6REC4 459 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 BCAP31P51572 246 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 WWP1Q9H0M0 922 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 CCDC195A0A1B0GUA6 201 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 GNPATO15228 680 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 S100GP29377 79 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 LPIN2Q92539 896 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 ANAPC7Q9UJX3 599 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 PLAAQ9Y263 795 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 PDE9AO76083 593 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 PFKFB1P16118 471 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 ATP12AP54707 1039 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 NRG3P56975 720 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 C17orf80Q9BSJ5 609 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 WDR11Q9BZH6 1224 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 PDE8AO60658 829 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 VPS11Q9H270 941 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 TSC22D2O75157 780 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 ALAS1P13196 640 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 TGFBRAP1Q8WUH2 860 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMAD4-201ENST00000342988 PSMD2Q13200 908 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 PLEKHM2Q8IWE5 1019 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 MICU2Q8IYU8 434 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 SPATA5Q8NB90 893 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 CALML6Q8TD86 181 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 DOLKQ9UPQ8 538 aa18.62■□□□□ 0.57
SMAD4-201ENST00000342988 IL12RB1P42701 662 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 LRRC59Q96AG4 307 aaKnown RBP18.61■□□□□ 0.57
SMAD4-201ENST00000342988 FLT3P36888 993 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 TTC39CQ8N584 583 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 GIMAP8Q8ND71 665 aaPredicted RBP18.61■□□□□ 0.57
SMAD4-201ENST00000342988 EXOSC4Q9NPD3 245 aaKnown RBP18.61■□□□□ 0.57
SMAD4-201ENST00000342988 RPN2P04844 631 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 CXCR5P32302 372 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 PGM1P36871 562 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 ARFIP2P53365 341 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 KCTD2Q14681 263 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 SERTAD1Q9UHV2 236 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 EVPLLA8MZ36 301 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 GCFC2P16383 781 aaKnown RBP18.61■□□□□ 0.57
SMAD4-201ENST00000342988 PPP3CCP48454 512 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 ARHGDIBP52566 201 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 POLA2Q14181 598 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 GSTA3Q16772 222 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 NDUFAF6Q330K2 333 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 HEATR6Q6AI08 1181 aaKnown RBP18.61■□□□□ 0.57
SMAD4-201ENST00000342988 NFRKBQ6P4R8 1299 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 KLHL20Q9Y2M5 609 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 CDO1Q16878 200 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 CERKLQ49MI3 558 aaPredicted RBP18.61■□□□□ 0.57
SMAD4-201ENST00000342988 NUP85Q9BW27 656 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 ZNF532Q9HCE3 1301 aa18.61■□□□□ 0.57
SMAD4-201ENST00000342988 ALBP02768 609 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 RRM2P31350 389 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 TRIQKQ629K1 86 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 CASP8Q14790 479 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 ZBED2Q9BTP6 218 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 SSH2Q76I76 1423 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 PIPSLA2A3N6 862 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 ASAP3Q8TDY4 903 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 AFG1LQ8WV93 481 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 DSCC1Q9BVC3 393 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 ABCC1P33527 1531 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 NUP93Q8N1F7 819 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 POLIQ9UNA4 740 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 IKBKBO14920 756 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 CHRNA3P32297 505 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 KPNB1Q14974 876 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms