RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 LEXMQ3ZCV2 418 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 ARL6IP4Q66PJ3 421 aaKnown RBP14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 KCNT2Q6UVM3 1135 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 BRAPQ7Z569 592 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 SPRYD3Q8NCJ5 442 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 HELQQ8TDG4 1101 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 ASAP3Q8TDY4 903 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 ADAMTS19Q8TE59 1207 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 SNX29Q8TEQ0 813 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 POF1BQ8WVV4 589 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 PRIMPOLQ96LW4 560 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 POLR3FQ9H1D9 316 aaPredicted RBP14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 C2orf40Q9H1Z8 148 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 PUF60Q9UHX1 559 aaKnown RBP14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 PCDHB2Q9Y5E7 798 aa14.79□□□□□ -0.04
SIRPB3P-201ENST00000340424 TTC28Q96AY4 2481 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 TSPAN1O60635 241 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 CYP11B2P19099 503 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 KRT17Q04695 432 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 MBTD1Q05BQ5 628 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 CAMK1Q14012 370 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 PPP2R5AQ15172 486 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 PADI6Q6TGC4 694 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 LRRC55Q6ZSA7 311 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 MRPL10Q7Z7H8 261 aaKnown RBP14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 ZBTB8OSQ8IWT0 167 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 HACE1Q8IYU2 909 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 INTS4Q96HW7 963 aaKnown RBP14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 UHRF1Q96T88 793 aaPredicted RBP14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 TLR9Q9NR96 1032 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 KANSL3Q9P2N6 904 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 STK39Q9UEW8 545 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 FAM50BQ9Y247 325 aa14.78□□□□□ -0.04
SIRPB3P-201ENST00000340424 ATG2AQ2TAZ0 1938 aa14.77□□□□□ -0.04
SIRPB3P-201ENST00000340424 TNFRSF10AO00220 468 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 SLC26A4O43511 780 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 NCLP19338 710 aaKnown RBP14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 KCNA5P22460 613 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 ALDH7A1P49419 539 aaKnown RBP14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 KCNQ1P51787 676 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 BMS1Q14692 1282 aaKnown RBP14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 CTC1Q2NKJ3 1217 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 NOMO2Q5JPE7 1267 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 CDCA2Q69YH5 1023 aaPredicted RBP14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 URGCPQ8TCY9 931 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 MRPS27Q92552 414 aaKnown RBP14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 KIFAP3Q92845 792 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 CDCA3Q99618 268 aaPredicted RBP14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 NT5C3AQ9H0P0 336 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 NGRNQ9NPE2 291 aaKnown RBP14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 PRMT7Q9NVM4 692 aaPredicted RBP14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 SPG21Q9NZD8 308 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 KIAA1024Q9UPX6 916 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 DNM3Q9UQ16 869 aa14.77□□□□□ -0.05
SIRPB3P-201ENST00000340424 PLXNA4Q9HCM2 1894 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 BRWD1Q9NSI6 2320 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 ZMYM2Q9UBW7 1377 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 PHLPP2Q6ZVD8 1323 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 LRRIQ4A6NIV6 560 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 EYA4O95677 639 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 DNAJB1P25685 340 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 TIE1P35590 1138 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 NAMPTP43490 491 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 HYAL1Q12794 435 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 AMHR2Q16671 573 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 FAM187BQ17R55 369 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 UBXN11Q5T124 520 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 IFT74Q96LB3 600 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 AK8Q96MA6 479 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 TIPINQ9BVW5 301 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 CSRNP2Q9H175 543 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 BHMT2Q9H2M3 363 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 RSAD1Q9HA92 442 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 RYDENQ9NUL5 291 aaKnown RBP14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 DDX19AQ9NUU7 478 aaKnown RBP14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 CLDND1Q9NY35 253 aa14.76□□□□□ -0.05
SIRPB3P-201ENST00000340424 A0A087WWV3 80 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 A0A1B0GUA9 196 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 FSCN2O14926 492 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 INPPL1O15357 1258 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 OFD1O75665 1012 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 EFNA5P52803 228 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 BCAR1P56945 870 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 RNASELQ05823 741 aaKnown RBP14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 HYIQ5T013 277 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 SLC27A1Q6PCB7 646 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 AGMOQ6ZNB7 445 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 SLC39A11Q8N1S5 342 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 EFHBQ8N7U6 833 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 MICAL1Q8TDZ2 1067 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 LPPQ93052 612 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 TMEM169Q96HH4 297 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 TRIM6Q9C030 488 aaPredicted RBP14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 GPRC5CQ9NQ84 441 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 TBC1D13Q9NVG8 400 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 HCSTQ9UBK5 93 aa14.75□□□□□ -0.05
SIRPB3P-201ENST00000340424 GALR2O43603 387 aaPredicted RBP14.74□□□□□ -0.05
SIRPB3P-201ENST00000340424 SRGAP2BP0DMP2 458 aa14.74□□□□□ -0.05
SIRPB3P-201ENST00000340424 ITGA4P13612 1032 aa14.74□□□□□ -0.05
SIRPB3P-201ENST00000340424 ARF4P18085 180 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms