RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 SGPL1O95470 568 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 EIF3BP55884 814 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 ATP11AP98196 1134 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 PWP2Q15269 919 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 KYNUQ16719 465 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 KIRREL3Q8IZU9 778 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 SUPT20HQ8NEM7 779 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 CAVIN3Q969G5 261 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 RMDN3Q96TC7 470 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 MYCBPQ99417 103 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 SEMA4AQ9H3S1 761 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 F8VZ95 297 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 SGK1O00141 431 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 SUN1O94901 812 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 SLC12A3P55017 1021 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 ZNF844Q08AG5 666 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 PPP1R21Q6ZMI0 780 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 BARGINQ6ZT62 677 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 DHX38Q92620 1227 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 MASTLQ96GX5 879 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 TMBIM4Q9HC24 238 aa11.89□□□□□ -0.51
SEMA4D-201ENST00000339861 TCP11X1B4DZS4 312 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 TULP2O00295 520 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 BRAFP15056 766 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 FECHP22830 423 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 PEX19P40855 299 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 KRT17Q04695 432 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 BRDTQ58F21 947 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 C6orf118Q5T5N4 469 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 TMEM270Q6UE05 265 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 KCNV2Q8TDN2 545 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 KRT35Q92764 455 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 PPP1R12CQ9BZL4 782 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 TRIM7Q9C029 511 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 TOPORSQ9NS56 1045 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 NYAP2Q9P242 653 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 MYO3BQ8WXR4 1341 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 IL1R1P14778 569 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 PCK1P35558 622 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 CCDC89Q8N998 374 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 SPIRE2Q8WWL2 714 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 RUNDC3BQ96NL0 473 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 XPO6Q96QU8 1125 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 IWS1Q96ST2 819 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 UNC45AQ9H3U1 944 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 CNOT10Q9H9A5 744 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 RAB20Q9NX57 234 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 SUCLA2Q9P2R7 463 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 NXF1Q9UBU9 619 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 LRRD1A4D1F6 860 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 M0R2N6 131 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 ALDH3A1P30838 453 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 MARCKSL1P49006 195 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 SMAD1Q15797 465 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 BSPRYQ5W0U4 402 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 CBWD2Q8IUF1 395 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 ACSF2Q96CM8 615 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 INPP4AQ96PE3 977 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 TMEM39BQ9GZU3 492 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 GANQ9H2C0 597 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 GDF3Q9NR23 364 aa11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 ZNF277Q9NRM2 450 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-201ENST00000339861 EXOC1LA0A1B0GW35 172 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 H0Y3Z8 333 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 QARSP47897 775 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 ACOT2P49753 483 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 DLG4P78352 724 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 IFI35P80217 286 aaPredicted RBP11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 ADCY2Q08462 1091 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 APOBEC3HQ6NTF7 200 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 SEPT14Q6ZU15 432 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 UBXN6Q9BZV1 441 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 SAYSD1Q9NPB0 183 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 PCDHGC5Q9Y5F6 944 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 DCDC2CA8MYV0 355 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 MEIS2O14770 477 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 HNRNPH3P31942 346 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 SLMAPQ14BN4 828 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 EPHA7Q15375 998 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 ALG13Q9NP73 1137 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 FGFR1OP2Q9NVK5 253 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 MIF4GDA9UHW6 222 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 PODXLO00592 558 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 SHBGP04278 402 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 TMEM253P0C7T8 217 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 SEZ6Q53EL9 994 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 IRF2BP2Q7Z5L9 587 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 LRRC34Q8IZ02 419 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 GJD4Q96KN9 370 aaPredicted RBP11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 NEUROG2Q9H2A3 272 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 KCTD10Q9H3F6 313 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 PRM3Q9NNZ6 103 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 SLC40A1Q9NP59 571 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 LRRC4BQ9NT99 713 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 ADAM22Q9P0K1 906 aa11.87□□□□□ -0.51
SEMA4D-201ENST00000339861 NR2E1Q9Y466 385 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms