RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 FGGP02679 453 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 PLS3P13797 630 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 TRIP13Q15645 432 aaPredicted RBP13.41□□□□□ -0.26
BRPF3-201ENST00000339717 ZNF658Q5TYW1 1059 aaPredicted RBP13.41□□□□□ -0.26
BRPF3-201ENST00000339717 TTC27Q6P3X3 843 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 LRRC6Q86X45 466 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 RHOT2Q8IXI1 618 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 SMYD1Q8NB12 490 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 NSUN7Q8NE18 718 aaKnown RBP13.41□□□□□ -0.26
BRPF3-201ENST00000339717 YIPF2Q9BWQ6 316 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 ZBTB1Q9Y2K1 713 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 PTPN22Q9Y2R2 807 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 YEATS2Q9ULM3 1422 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 PABPN1LA6NDY0 278 aaKnown RBP13.41□□□□□ -0.26
BRPF3-201ENST00000339717 DDX5P17844 614 aaKnown RBP13.41□□□□□ -0.26
BRPF3-201ENST00000339717 KCNJ2P63252 427 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 TMPRSS15P98073 1019 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 ACAP2Q15057 778 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 TBC1D10BQ4KMP7 808 aaPredicted RBP13.41□□□□□ -0.26
BRPF3-201ENST00000339717 ATAD3BQ5T9A4 648 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 CHST3Q7LGC8 479 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 SAPCD2Q86UD0 394 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 AKAP14Q86UN6 197 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 DEPTORQ8TB45 409 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 PAGR1Q9BTK6 254 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 SAR1AQ9NR31 198 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 AASDHPPTQ9NRN7 309 aa13.41□□□□□ -0.26
BRPF3-201ENST00000339717 RBM12Q9NTZ6 932 aaKnown RBP13.41□□□□□ -0.26
BRPF3-201ENST00000339717 DDX25Q9UHL0 483 aaKnown RBP13.41□□□□□ -0.26
BRPF3-201ENST00000339717 APOL1O14791 398 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 PRPF6O94906 941 aaKnown RBP13.4□□□□□ -0.26
BRPF3-201ENST00000339717 CHRNA3P32297 505 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 ADAM9Q13443 819 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 DCAF17Q5H9S7 520 aaPredicted RBP13.4□□□□□ -0.26
BRPF3-201ENST00000339717 MRPL39Q9NYK5 338 aaKnown RBP13.4□□□□□ -0.26
BRPF3-201ENST00000339717 GNPATO15228 680 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 SNX2O60749 519 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 UNC5CO95185 931 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 ENO1P06733 434 aaKnown RBP13.4□□□□□ -0.26
BRPF3-201ENST00000339717 VCPP55072 806 aaKnown RBP13.4□□□□□ -0.26
BRPF3-201ENST00000339717 TTMPQ5BVD1 217 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 LIN9Q5TKA1 542 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 GALNT4Q8N4A0 578 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 NUDT16Q96DE0 195 aaKnown RBP13.4□□□□□ -0.26
BRPF3-201ENST00000339717 PPCSQ9HAB8 311 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 MLXIPQ9HAP2 919 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 SPDYE5A6NIY4 337 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 SAC3D1A6NKF1 404 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 LARGE1O95461 756 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 CYLDQ9NQC7 956 aa13.4□□□□□ -0.26
BRPF3-201ENST00000339717 RPRD1BQ9NQG5 326 aaKnown RBP13.4□□□□□ -0.26
BRPF3-201ENST00000339717 HTR3EA5X5Y0 456 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 TBC1D25Q3MII6 688 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 RUNDC3AQ59EK9 446 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 UBXN6Q9BZV1 441 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
BRPF3-201ENST00000339717 SYNGAP1Q96PV0 1343 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 CENPXA8MT69 81 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 GNB5O14775 395 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 STX7O15400 261 aaKnown RBP13.39□□□□□ -0.27
BRPF3-201ENST00000339717 TRMUO75648 421 aaKnown RBP13.39□□□□□ -0.27
BRPF3-201ENST00000339717 SERPINB2P05120 415 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 PORP16435 677 aaPredicted RBP13.39□□□□□ -0.27
BRPF3-201ENST00000339717 CCNCP24863 283 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 CABP4P57796 275 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 PTH1RQ03431 593 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 MAN2A1Q16706 1144 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 IYDQ6PHW0 289 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 RNF19BQ6ZMZ0 732 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 CLVS1Q8IUQ0 354 aaPredicted RBP13.39□□□□□ -0.27
BRPF3-201ENST00000339717 LBHD1Q9BQE6 289 aaPredicted RBP13.39□□□□□ -0.27
BRPF3-201ENST00000339717 CORO1BQ9BR76 489 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 DDX47Q9H0S4 455 aaKnown RBP13.39□□□□□ -0.27
BRPF3-201ENST00000339717 CFAP65Q6ZU64 1925 aaKnown RBP13.39□□□□□ -0.27
BRPF3-201ENST00000339717 KRT16P08779 473 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 ATF4P18848 351 aaPredicted RBP13.39□□□□□ -0.27
BRPF3-201ENST00000339717 CIITAP33076 1130 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 HPCAP84074 193 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 NR1I3Q14994 352 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 SLC9C2Q5TAH2 1124 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 MAP4K1Q92918 833 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 BTBD10Q9BSF8 475 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 GRIP2Q9C0E4 1043 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 NMRK1Q9NWW6 199 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 TRIM33Q9UPN9 1127 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 RAPGEF6Q8TEU7 1601 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 PLCH2O75038 1416 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 KLHL2O95198 593 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 MYCLP1P12525 358 aaPredicted RBP13.39□□□□□ -0.27
BRPF3-201ENST00000339717 CPA3P15088 417 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 KDSRQ06136 332 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 TWF2Q6IBS0 349 aaKnown RBP13.39□□□□□ -0.27
BRPF3-201ENST00000339717 LUZP2Q86TE4 346 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 MAGEF1Q9HAY2 307 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 COPG2Q9UBF2 871 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 NLRP1Q9C000 1473 aa13.39□□□□□ -0.27
BRPF3-201ENST00000339717 POTECB2RU33 542 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 PPP2R5BQ15173 497 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 C1QTNF12Q5T7M4 302 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms