RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 HSPA1LP34931 641 aa13.34□□□□□ -0.27
RIOK3-201ENST00000339486 AP3B2Q13367 1082 aa13.34□□□□□ -0.27
RIOK3-201ENST00000339486 FAM20AQ96MK3 541 aa13.34□□□□□ -0.27
RIOK3-201ENST00000339486 MMTAG2Q9BU76 263 aaKnown RBP13.34□□□□□ -0.27
RIOK3-201ENST00000339486 JMJD4Q9H9V9 463 aa13.34□□□□□ -0.27
RIOK3-201ENST00000339486 ABCF3Q9NUQ8 709 aa13.34□□□□□ -0.27
RIOK3-201ENST00000339486 DCDC2CA8MYV0 355 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 DNM1LO00429 736 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 DDX3XO00571 662 aaKnown RBP eCLIP13.33□□□□□ -0.28
RIOK3-201ENST00000339486 GYG2O15488 501 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 CYP26A1O43174 497 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 MED24O75448 989 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 CD19P15391 556 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 CACNB3P54284 484 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 PTENP60484 403 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 HGSNATQ68CP4 663 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 NT5DC3Q86UY8 548 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 LONP2Q86WA8 852 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 CATSPER3Q86XQ3 398 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.33□□□□□ -0.28
RIOK3-201ENST00000339486 SNF8Q96H20 258 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 FAM118BQ9BPY3 351 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 CDH16O75309 829 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 DRD4P21917 467 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 LMNB2Q03252 620 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 SLC30A5Q8TAD4 765 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 TMEM206Q9H813 350 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 KIF9Q9HAQ2 790 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 FMN2Q9NZ56 1722 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 FLT1P17948 1338 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 GGPS1O95749 300 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 DYNLT1P63172 113 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 GRAPQ13588 217 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 ERMARDQ5T6L9 678 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 C16orf86Q6ZW13 317 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 GRAPLQ8TC17 118 aaPredicted RBP13.33□□□□□ -0.28
RIOK3-201ENST00000339486 ZNF526Q8TF50 670 aaPredicted RBP13.33□□□□□ -0.28
RIOK3-201ENST00000339486 RNF25Q96BH1 459 aaPredicted RBP13.33□□□□□ -0.28
RIOK3-201ENST00000339486 GRAMD1AQ96CP6 724 aa13.33□□□□□ -0.28
RIOK3-201ENST00000339486 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.33□□□□□ -0.28
RIOK3-201ENST00000339486 PITPNM2Q9BZ72 1349 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 SLC16A3O15427 465 aaKnown RBP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 VAMP7P51809 220 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 RNASELQ05823 741 aaKnown RBP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 DNAJC3Q13217 504 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 ABCB5Q2M3G0 1257 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 ROPN1BQ9BZX4 212 aaPredicted RBP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 ROPN1Q9HAT0 212 aaPredicted RBP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 CFAP69A5D8W1 941 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 SRRM3A6NNA2 597 aaPredicted RBP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 GOLGA8SH3BPF8 625 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 GOLGA8MH3BSY2 632 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 FOXN3O00409 490 aaPredicted RBP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 ASAP2O43150 1006 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 RARGP13631 454 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 COILP38432 576 aaPredicted RBP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 CDR2Q01850 454 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 BBS9Q3SYG4 887 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 CFAP157Q5JU67 520 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 IZUMO3Q5VZ72 239 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 C4orf33Q8N1A6 199 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 XXYLT1Q8NBI6 393 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 SCFD2Q8WU76 684 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 PRCCQ92733 491 aaPredicted RBP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 CYTH2Q99418 400 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 WDR11Q9BZH6 1224 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 C15orf41Q9Y2V0 281 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 RASSF10A6NK89 507 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 DNAJC8O75937 253 aaPredicted RBP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 EYA4O95677 639 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 BMP3P12645 472 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 YWHAGP61981 247 aaKnown RBP eCLIP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 SATB1Q01826 763 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 SYDE2Q5VT97 1194 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 RFX8Q6ZV50 586 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 EIF1ADQ8N9N8 165 aaKnown RBP13.32□□□□□ -0.28
RIOK3-201ENST00000339486 CCDC110Q8TBZ0 833 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 NRXN3Q9Y4C0 1643 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 RGPD1P0DJD0 1748 aa13.32□□□□□ -0.28
RIOK3-201ENST00000339486 HNRNPDLO14979 420 aaKnown RBP13.31□□□□□ -0.28
RIOK3-201ENST00000339486 ALDH5A1P51649 535 aaPredicted RBP13.31□□□□□ -0.28
RIOK3-201ENST00000339486 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 BTBD6Q96KE9 485 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 SH3GL3Q99963 347 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 NEUROG2Q9H2A3 272 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 ALG13Q9NP73 1137 aaKnown RBP13.31□□□□□ -0.28
RIOK3-201ENST00000339486 MYH10P35580 1976 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 CES2O00748 559 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 MAP3K7O43318 606 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 RTN2O75298 545 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 MT-ND3P03897 115 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 INHBAP08476 426 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 PEX3P56589 373 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 ITPK1Q13572 414 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 AOC3Q16853 763 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 SLC13A5Q86YT5 568 aaPredicted RBP13.31□□□□□ -0.28
RIOK3-201ENST00000339486 SYT2Q8N9I0 419 aaPredicted RBP13.31□□□□□ -0.28
RIOK3-201ENST00000339486 DTX3LQ8TDB6 740 aa13.31□□□□□ -0.28
RIOK3-201ENST00000339486 AGAP11Q8TF27 550 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms