RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 GPAT2Q6NUI2 795 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 LBX2Q6XYB7 198 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 OLIG1Q8TAK6 271 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 MKNK1Q9BUB5 465 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 STK33Q9BYT3 514 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 GPR88Q9GZN0 384 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 DMAC2Q9NW81 257 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 BTBD7Q9P203 1132 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 LCMT1Q9UIC8 334 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 KRT14P02533 472 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 DLG4P78352 724 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 TTMPQ5BVD1 217 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 RNF207Q6ZRF8 634 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 SYTL5Q8TDW5 730 aaPredicted RBP17.69■□□□□ 0.42
LITAF-201ENST00000339430 SH3GL2Q99962 352 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 TMEM59LQ9UK28 342 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 NOC2LQ9Y3T9 749 aaKnown RBP17.69■□□□□ 0.42
LITAF-201ENST00000339430 UBE4BO95155 1302 aa17.69■□□□□ 0.42
LITAF-201ENST00000339430 TMEM150BA6NC51 233 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 GUCY2CP25092 1073 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 GHRHRQ02643 423 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 BFSP1Q12934 665 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 TTC19Q6DKK2 380 aaPredicted RBP17.68■□□□□ 0.42
LITAF-201ENST00000339430 PBKQ96KB5 322 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 LOXHD1Q8IVV2 1947 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 OPA1O60313 960 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 IVLP07476 585 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 ALS2CLQ60I27 953 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 KCTD16Q68DU8 428 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 SLC30A5Q8TAD4 765 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 MS4A4AQ96JQ5 239 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 PAGR1Q9BTK6 254 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 DDX47Q9H0S4 455 aaKnown RBP17.68■□□□□ 0.42
LITAF-201ENST00000339430 GPBP1L1Q9HC44 474 aaPredicted RBP17.68■□□□□ 0.42
LITAF-201ENST00000339430 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.68■□□□□ 0.42
LITAF-201ENST00000339430 KCND2Q9NZV8 630 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 APEX2Q9UBZ4 518 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 IGSF9BQ9UPX0 1349 aa17.68■□□□□ 0.42
LITAF-201ENST00000339430 GOLGA8KD6RF30 607 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 RPS6KA5O75582 802 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 MUTP22033 750 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 HUNKP57058 714 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 BAATQ14032 418 aaPredicted RBP17.67■□□□□ 0.42
LITAF-201ENST00000339430 PHLDB3Q6NSJ2 640 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 PALB2Q86YC2 1186 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 ZSWIM2Q8NEG5 633 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 SLC35G2Q8TBE7 412 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 RIT2Q99578 217 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 RABEP2Q9H5N1 569 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 MAP3K20Q9NYL2 800 aaKnown RBP17.67■□□□□ 0.42
LITAF-201ENST00000339430 TAS2R14Q9NYV8 317 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 RSPH14Q9UHP6 348 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 PGRMC1O00264 195 aaKnown RBP17.67■□□□□ 0.42
LITAF-201ENST00000339430 CES2O00748 559 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 PPP1R37O75864 691 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 ZBTB48P10074 688 aaPredicted RBP17.67■□□□□ 0.42
LITAF-201ENST00000339430 ITGA4P13612 1032 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 OSBPP22059 807 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 ANXA13P27216 316 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 GTF2A2P52657 109 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 ERVK-9P63128 1117 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 ITGB3BPQ13352 177 aaPredicted RBP17.67■□□□□ 0.42
LITAF-201ENST00000339430 NNTQ13423 1086 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 HLTFQ14527 1009 aaKnown RBP eCLIP17.67■□□□□ 0.42
LITAF-201ENST00000339430 CFAP58Q5T655 872 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 NT5DC3Q86UY8 548 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 DDX42Q86XP3 938 aaKnown RBP eCLIP17.67■□□□□ 0.42
LITAF-201ENST00000339430 SH2D3CQ8N5H7 860 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 ACTRT1Q8TDG2 376 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 SCFD2Q8WU76 684 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 TAAR1Q96RJ0 339 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 ACAD9Q9H845 621 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 STXBP5LQ9Y2K9 1186 aa17.67■□□□□ 0.42
LITAF-201ENST00000339430 BUB1BO60566 1050 aaPredicted RBP17.66■□□□□ 0.42
LITAF-201ENST00000339430 CETPP11597 493 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 PPFIA1Q13136 1202 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 PPP2R5AQ15172 486 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 SPRYD7Q5W111 196 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 SLFN11Q7Z7L1 901 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 LMBR1Q8WVP7 490 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 CBWD1Q9BRT8 395 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 STRA6Q9BX79 667 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 A0A0G2JMZ2 1700 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 EMSYQ7Z589 1322 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 A0A0A6YYK5 440 aaPredicted RBP17.66■□□□□ 0.42
LITAF-201ENST00000339430 CCL15-CCL14A0A0B4J2E2 113 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 KRIT1O00522 736 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 DHX15O43143 795 aaKnown RBP17.66■□□□□ 0.42
LITAF-201ENST00000339430 CCL15Q16663 113 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 TKFCQ3LXA3 575 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 SAMD3Q8N6K7 520 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 ARHGEF26Q96DR7 871 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.66■□□□□ 0.42
LITAF-201ENST00000339430 SPATC1LQ9H0A9 340 aa17.66■□□□□ 0.42
LITAF-201ENST00000339430 RPTORQ8N122 1335 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 FOXN3O00409 490 aaPredicted RBP17.65■□□□□ 0.42
LITAF-201ENST00000339430 P4HBP07237 508 aaKnown RBP17.65■□□□□ 0.42
LITAF-201ENST00000339430 CYP2C8P10632 490 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 KRT13P13646 458 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 EIF2AK2P19525 551 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms