RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 TMC5Q6UXY8 1006 aa15.89■□□□□ 0.13
COMMD4-202ENST00000338995 CCDC149Q6ZUS6 474 aa15.89■□□□□ 0.13
COMMD4-202ENST00000338995 MRPL10Q7Z7H8 261 aaKnown RBP15.89■□□□□ 0.13
COMMD4-202ENST00000338995 NEK8Q86SG6 692 aa15.89■□□□□ 0.13
COMMD4-202ENST00000338995 KSR1Q8IVT5 923 aa15.89■□□□□ 0.13
COMMD4-202ENST00000338995 PRPF31Q8WWY3 499 aaKnown RBP15.89■□□□□ 0.13
COMMD4-202ENST00000338995 TM6SF1Q9BZW5 370 aa15.89■□□□□ 0.13
COMMD4-202ENST00000338995 RSAD1Q9HA92 442 aa15.89■□□□□ 0.13
COMMD4-202ENST00000338995 IFT122Q9HBG6 1241 aa15.89■□□□□ 0.13
COMMD4-202ENST00000338995 WDR81Q562E7 1941 aa15.89■□□□□ 0.13
COMMD4-202ENST00000338995 H0Y858 1186 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 M0R2N6 131 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 TBX3O15119 743 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 ERLIN2O94905 339 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 SLC11A1P49279 550 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 CLCN5P51795 746 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 NPEPPSP55786 919 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 TOB2Q14106 344 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-202ENST00000338995 EPHA7Q15375 998 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 PLA2G4FQ68DD2 849 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 ASTLQ6HA08 431 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-202ENST00000338995 GPR149Q86SP6 731 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 C4orf19Q8IY42 314 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 HACE1Q8IYU2 909 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 KLHL5Q96PQ7 755 aa15.88■□□□□ 0.13
COMMD4-202ENST00000338995 EML1O00423 815 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 CCNT1O60563 726 aaKnown RBP15.87■□□□□ 0.13
COMMD4-202ENST00000338995 PDGFBP01127 241 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-202ENST00000338995 URODP06132 367 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 ASGR2P07307 311 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 ITGA4P13612 1032 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 AXLP30530 894 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 LAMTOR4Q0VGL1 99 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 STK3Q13188 491 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 MXD4Q14582 209 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-202ENST00000338995 PTPN14Q15678 1187 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 XKR9Q5GH70 373 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 CYP26C1Q6V0L0 522 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 AGMOQ6ZNB7 445 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 C15orf39Q6ZRI6 1047 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 TMEM173Q86WV6 379 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-202ENST00000338995 ZNF280BQ86YH2 543 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 SLFN12Q8IYM2 578 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 TMEM143Q96AN5 459 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 DHX33Q9H6R0 707 aaKnown RBP15.87■□□□□ 0.13
COMMD4-202ENST00000338995 ZSWIM4Q9H7M6 989 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 PDRG1Q9NUG6 133 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 FAM86C1Q9NVL1 165 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 DNAJB4Q9UDY4 337 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 CDH22Q9UJ99 828 aa15.87■□□□□ 0.13
COMMD4-202ENST00000338995 WDFY4Q6ZS81 3184 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 NRP1O14786 923 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 SSBP05455 408 aaKnown RBP eCLIP15.86■□□□□ 0.13
COMMD4-202ENST00000338995 ADH1AP07327 375 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
COMMD4-202ENST00000338995 YWHABP31946 246 aaKnown RBP15.86■□□□□ 0.13
COMMD4-202ENST00000338995 TDGQ13569 410 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 TFDP1Q14186 410 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 RNF149Q8NC42 400 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 WASF1Q92558 559 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 STAMQ92783 540 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 CCDC51Q96ER9 411 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 KCNMB3Q9NPA1 279 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 IGSF9Q9P2J2 1179 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 KCNJ14Q9UNX9 436 aa15.86■□□□□ 0.13
COMMD4-202ENST00000338995 MEIS3P2A8K0S8 358 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 PROB1E7EW31 1015 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 SLC37A4O43826 429 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 DDHD2O94830 711 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 POMCP01189 267 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 CNPP09543 421 aaKnown RBP15.85■□□□□ 0.13
COMMD4-202ENST00000338995 HOXA11P31270 313 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-202ENST00000338995 CLCN4P51793 760 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 AK2P54819 239 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 KANK3Q6NY19 840 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 FERMT3Q86UX7 667 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 MTRQ99707 1265 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 LARP6Q9BRS8 491 aaKnown RBP15.85■□□□□ 0.13
COMMD4-202ENST00000338995 COLEC11Q9BWP8 271 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 TRIM6Q9C030 488 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-202ENST00000338995 BRMS1Q9HCU9 246 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 FBXL21Q9UKT6 434 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 VAV3Q9UKW4 847 aa15.85■□□□□ 0.13
COMMD4-202ENST00000338995 PTPRZ1P23471 2315 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-202ENST00000338995 SOD2P04179 222 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 OR1G1P47890 313 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 EMC2Q15006 297 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 NCAPH2Q6IBW4 605 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 NOTUMQ6P988 496 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 TPH2Q8IWU9 490 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 FLCNQ8NFG4 579 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 CMASQ8NFW8 434 aaPredicted RBP15.84■□□□□ 0.13
COMMD4-202ENST00000338995 BCL7CQ8WUZ0 217 aaPredicted RBP15.84■□□□□ 0.13
COMMD4-202ENST00000338995 CCDC43Q96MW1 224 aaKnown RBP15.84■□□□□ 0.13
COMMD4-202ENST00000338995 RPS6KC1Q96S38 1066 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 RTP3Q9BQQ7 232 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 LXNQ9BS40 222 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 PHF20Q9BVI0 1012 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 CACNA1HO95180 2353 aa15.84■□□□□ 0.13
COMMD4-202ENST00000338995 INO80B-WBP1J3KQ70 363 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms