RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 OLFML2BQ68BL8 750 aa12.07□□□□□ -0.48
LRP1-202ENST00000338962 TRAPPC11Q7Z392 1133 aa12.07□□□□□ -0.48
LRP1-202ENST00000338962 MAML3Q96JK9 1138 aa12.07□□□□□ -0.48
LRP1-202ENST00000338962 CEP170P1Q96L14 293 aa12.07□□□□□ -0.48
LRP1-202ENST00000338962 ALS2CR12Q96Q35 445 aa12.07□□□□□ -0.48
LRP1-202ENST00000338962 APBA2Q99767 749 aa12.07□□□□□ -0.48
LRP1-202ENST00000338962 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.07□□□□□ -0.48
LRP1-202ENST00000338962 ST6GALNAC4Q9H4F1 302 aa12.07□□□□□ -0.48
LRP1-202ENST00000338962 BZW2Q9Y6E2 419 aaKnown RBP12.07□□□□□ -0.48
LRP1-202ENST00000338962 CTAGE15A4D2H0 777 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 SPATA31C2B4DYI2 1134 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 SLC16A4O15374 487 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 CTAGE8P0CG41 777 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 KRT13P13646 458 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 GTF2BQ00403 316 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 PAPD7Q5XG87 772 aaKnown RBP12.06□□□□□ -0.48
LRP1-202ENST00000338962 SWSAP1Q6NVH7 229 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 DPY19L2P1Q6NXN4 242 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 INTS8Q75QN2 995 aaKnown RBP12.06□□□□□ -0.48
LRP1-202ENST00000338962 CTAGE6Q86UF2 777 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 CTAGE4Q8IX94 777 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 KRT222Q8N1A0 295 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 PXYLP1Q8TE99 480 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 HDAC6Q9UBN7 1215 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 ADAMTS1Q9UHI8 967 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 TRIM17Q9Y577 477 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 CCDC169A6NNP5 214 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 PJA2O43164 708 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 ZNF862O60290 1169 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 EIF3JO75822 258 aaKnown RBP12.06□□□□□ -0.48
LRP1-202ENST00000338962 TRIM49P0CI25 452 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 TRIM49CP0CI26 452 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 CYP2B6P20813 491 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 ALDH5A1P51649 535 aaPredicted RBP12.06□□□□□ -0.48
LRP1-202ENST00000338962 NCKAP1LP55160 1127 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 ACTR2P61160 394 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 COL13A1Q5TAT6 717 aaPredicted RBP12.06□□□□□ -0.48
LRP1-202ENST00000338962 MIS18BP1Q6P0N0 1132 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 TMEM174Q8WUU8 243 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 KIFAP3Q92845 792 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 JRKLQ9Y4A0 524 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 CAPN6Q9Y6Q1 641 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 KIAA1217Q5T5P2 1943 aa12.06□□□□□ -0.48
LRP1-202ENST00000338962 ASB14A6NK59 587 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 TFRCP02786 760 aaKnown RBP12.05□□□□□ -0.48
LRP1-202ENST00000338962 CLCN6P51797 869 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 SNRPFP62306 86 aaKnown RBP12.05□□□□□ -0.48
LRP1-202ENST00000338962 MYL7Q01449 175 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 PRKCEQ02156 737 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 CCDC60Q8IWA6 550 aaPredicted RBP12.05□□□□□ -0.48
LRP1-202ENST00000338962 C12orf56Q8IXR9 622 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 XXYLT1Q8NBI6 393 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 NOX5Q96PH1 765 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 CBWD1Q9BRT8 395 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 EPC1Q9H2F5 836 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 PCIF1Q9H4Z3 704 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 MLXIPQ9HAP2 919 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 SIX2Q9NPC8 291 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
LRP1-202ENST00000338962 EXOC7Q9UPT5 735 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 PTPN22Q9Y2R2 807 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 SYNGAP1Q96PV0 1343 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 ZNF236Q9UL36 1845 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 A0A087X0T9 212 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 TISP43B9A030 160 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 SORBS3O60504 671 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 DGAT1O75907 488 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 MOCS3O95396 460 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 FAM228BP0C875 321 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 NPTX2P47972 431 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 NAP1L1P55209 391 aaKnown RBP12.05□□□□□ -0.48
LRP1-202ENST00000338962 PTK2Q05397 1052 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 CBWD6Q4V339 395 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 CBWD3Q5JTY5 395 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 CBWD5Q5RIA9 395 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 IRF2BP2Q7Z5L9 587 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 CTU1Q7Z7A3 348 aaKnown RBP12.05□□□□□ -0.48
LRP1-202ENST00000338962 VPS36Q86VN1 386 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 RNF10Q8N5U6 811 aaKnown RBP12.05□□□□□ -0.48
LRP1-202ENST00000338962 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 TINF2Q9BSI4 451 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 C17orf75Q9HAS0 396 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 KMT5AQ9NQR1 393 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 HSPBP1Q9NZL4 362 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 FLRT1Q9NZU1 646 aa12.05□□□□□ -0.48
LRP1-202ENST00000338962 JAM2P57087 298 aa12.04□□□□□ -0.48
LRP1-202ENST00000338962 SLC20A2Q08357 652 aa12.04□□□□□ -0.48
LRP1-202ENST00000338962 CETN1Q12798 172 aa12.04□□□□□ -0.48
LRP1-202ENST00000338962 PKN2Q16513 984 aaKnown RBP12.04□□□□□ -0.48
LRP1-202ENST00000338962 IQCEQ6IPM2 695 aa12.04□□□□□ -0.48
LRP1-202ENST00000338962 TMCO3Q6UWJ1 677 aa12.04□□□□□ -0.48
LRP1-202ENST00000338962 ABHD15Q6UXT9 468 aa12.04□□□□□ -0.48
LRP1-202ENST00000338962 CYFIP1Q7L576 1253 aa12.04□□□□□ -0.48
LRP1-202ENST00000338962 HVCN1Q96D96 273 aa12.04□□□□□ -0.48
LRP1-202ENST00000338962 TBX20Q9UMR3 447 aa12.04□□□□□ -0.48
LRP1-202ENST00000338962 DENND3A2RUS2 1198 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 SNAI1O95863 264 aaPredicted RBP12.03□□□□□ -0.48
LRP1-202ENST00000338962 SUPT20HL2P0C7V6 817 aa12.03□□□□□ -0.48
LRP1-202ENST00000338962 ICAM3P32942 547 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms