RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 DLG4P78352 724 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 EDRF1Q3B7T1 1238 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 HHATQ5VTY9 493 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 RBM17Q96I25 401 aaKnown RBP15.18■□□□□ 0.02
PCDH8-201ENST00000338862 CALR3Q96L12 384 aaKnown RBP15.18■□□□□ 0.02
PCDH8-201ENST00000338862 KIFC3Q9BVG8 833 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 GH1P01241 217 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 MXI1P50539 228 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 PEX3P56589 373 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 EPHA7Q15375 998 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 LLGL2Q6P1M3 1020 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 SLC16A4O15374 487 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 MSH4O15457 936 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 GAS8O95995 478 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 DNAJC3Q13217 504 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 SMAD1Q15797 465 aaKnown RBP15.18■□□□□ 0.02
PCDH8-201ENST00000338862 GNPTABQ3T906 1256 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 RINT1Q6NUQ1 792 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 DHX38Q92620 1227 aaKnown RBP15.18■□□□□ 0.02
PCDH8-201ENST00000338862 ACSF2Q96CM8 615 aaPredicted RBP15.18■□□□□ 0.02
PCDH8-201ENST00000338862 POLLQ9UGP5 575 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 SLC12A6Q9UHW9 1150 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 GPR75-ASB3A0A0A6YYF3 556 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 SERPINB2P05120 415 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 ZCWPW2Q504Y3 356 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 MIGA2Q7L4E1 593 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 AGAP11Q8TF27 550 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 TMEM237Q96Q45 408 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 STK33Q9BYT3 514 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 APEX2Q9UBZ4 518 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 SPEF2Q9C093 1822 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 ANKRD63C9JTQ0 380 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 ATP2B4P23634 1241 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 ABCB5Q2M3G0 1257 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 MIER3Q7Z3K6 550 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 MREGQ8N565 214 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 CPA5Q8WXQ8 436 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 NOP53Q9NZM5 478 aaKnown RBP15.17■□□□□ 0.02
PCDH8-201ENST00000338862 CA4P22748 312 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 TARSP26639 723 aaKnown RBP15.17■□□□□ 0.02
PCDH8-201ENST00000338862 ZNF394Q53GI3 561 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 MEX3CQ5U5Q3 659 aaKnown RBP15.17■□□□□ 0.02
PCDH8-201ENST00000338862 ARMC9Q7Z3E5 817 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 TBC1D22AQ8WUA7 517 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 CBWD1Q9BRT8 395 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 TRPC6Q9Y210 931 aa15.17■□□□□ 0.02
PCDH8-201ENST00000338862 TNNI1P19237 187 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 CD58P19256 250 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 ALDH5A1P51649 535 aaPredicted RBP15.16■□□□□ 0.02
PCDH8-201ENST00000338862 SLC12A3P55017 1021 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 CD302Q8IX05 232 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 LRRC57Q8N9N7 239 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 CDC42EP4Q9H3Q1 356 aaKnown RBP15.16■□□□□ 0.02
PCDH8-201ENST00000338862 GPRC5CQ9NQ84 441 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 KCNQ5Q9NR82 932 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.16■□□□□ 0.02
PCDH8-201ENST00000338862 PARP2Q9UGN5 583 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 USP15Q9Y4E8 981 aaPredicted RBP15.16■□□□□ 0.02
PCDH8-201ENST00000338862 RWDD2BP57060 319 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 TDRD3Q9H7E2 651 aaKnown RBP15.16■□□□□ 0.02
PCDH8-201ENST00000338862 ABCB11O95342 1321 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 EXOC1LA0A1B0GW35 172 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 RPS6KA4O75676 772 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 TNFRSF8P28908 595 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 MXRA7P84157 204 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 ERMARDQ5T6L9 678 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 SLC47A2Q86VL8 602 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 SYT2Q8N9I0 419 aaPredicted RBP15.16■□□□□ 0.02
PCDH8-201ENST00000338862 ERP27Q96DN0 273 aa15.16■□□□□ 0.02
PCDH8-201ENST00000338862 NAP1L4Q99733 375 aaKnown RBP15.16■□□□□ 0.02
PCDH8-201ENST00000338862 PHF2O75151 1096 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 RPA1P27694 616 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 PTENP60484 403 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 SPATA21Q7Z572 469 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 AMIGO3Q86WK7 504 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 ARHGEF19Q8IW93 802 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 SAYSD1Q9NPB0 183 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 LARSQ9P2J5 1176 aaKnown RBP15.15■□□□□ 0.02
PCDH8-201ENST00000338862 COG5Q9UP83 839 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 SYNGAP1Q96PV0 1343 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 ESYT2A0FGR8 921 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 TMEM253P0C7T8 217 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 BMP3P12645 472 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 POLD1P28340 1107 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 CHRNA3P32297 505 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 MSH2P43246 934 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 PPP4CP60510 307 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 SEMA3FQ13275 785 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 SLMAPQ14BN4 828 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 PREPLQ4J6C6 727 aaPredicted RBP15.15■□□□□ 0.02
PCDH8-201ENST00000338862 XKR9Q5GH70 373 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 TCHPQ9BT92 498 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 RBAK-RBAKDNI3L0D1 243 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 RASSF9O75901 435 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 CETN2P41208 172 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 RHBDL3P58872 404 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 SYDE2Q5VT97 1194 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 PHLDB3Q6NSJ2 640 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 TBC1D16Q8TBP0 767 aa15.15■□□□□ 0.02
PCDH8-201ENST00000338862 DTX3LQ8TDB6 740 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms