RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 CLDND1Q9NY35 253 aa23.21■■□□□ 1.31
RAB28-203ENST00000338176 K7ELQ4 463 aaPredicted RBP23.2■■□□□ 1.3
RAB28-203ENST00000338176 DLX2Q07687 328 aaPredicted RBP23.2■■□□□ 1.3
RAB28-203ENST00000338176 AAK1Q2M2I8 961 aa23.2■■□□□ 1.3
RAB28-203ENST00000338176 NOMO2Q5JPE7 1267 aa23.2■■□□□ 1.3
RAB28-203ENST00000338176 FAM173BQ6P4H8 233 aa23.2■■□□□ 1.3
RAB28-203ENST00000338176 GLB1LQ6UWU2 654 aa23.2■■□□□ 1.3
RAB28-203ENST00000338176 RBM23Q86U06 439 aaKnown RBP23.2■■□□□ 1.3
RAB28-203ENST00000338176 PNMA5Q96PV4 448 aa23.2■■□□□ 1.3
RAB28-203ENST00000338176 NFKBIZQ9BYH8 718 aa23.2■■□□□ 1.3
RAB28-203ENST00000338176 TBC1D13Q9NVG8 400 aa23.2■■□□□ 1.3
RAB28-203ENST00000338176 C5orf42Q9H799 3197 aa23.2■■□□□ 1.3
RAB28-203ENST00000338176 EDN1P05305 212 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 SYT1P21579 422 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 LTBRP36941 435 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 BCAR1P56945 870 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 GRIN1Q05586 938 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 TMEM173Q86WV6 379 aaPredicted RBP23.19■■□□□ 1.3
RAB28-203ENST00000338176 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.19■■□□□ 1.3
RAB28-203ENST00000338176 PABPC5Q96DU9 382 aaKnown RBP23.19■■□□□ 1.3
RAB28-203ENST00000338176 APOL6Q9BWW8 343 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 GBP3Q9H0R5 595 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 IPPQ9Y573 584 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 ZC3H11AO75152 810 aaKnown RBP eCLIP23.19■■□□□ 1.3
RAB28-203ENST00000338176 EYA4O95677 639 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 LIG1P18858 919 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 COL19A1Q14993 1142 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 CDCA2Q69YH5 1023 aaPredicted RBP23.19■■□□□ 1.3
RAB28-203ENST00000338176 NOTUMQ6P988 496 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 ZNF280BQ86YH2 543 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 MICAL1Q8TDZ2 1067 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 UHRF1Q96T88 793 aaPredicted RBP23.19■■□□□ 1.3
RAB28-203ENST00000338176 RUSC1Q9BVN2 902 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 CSRNP2Q9H175 543 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 NRDE2Q9H7Z3 1164 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 TLR9Q9NR96 1032 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 DNAJB4Q9UDY4 337 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 DNM3Q9UQ16 869 aa23.19■■□□□ 1.3
RAB28-203ENST00000338176 PER2O15055 1255 aa23.18■■□□□ 1.3
RAB28-203ENST00000338176 BRAPQ7Z569 592 aa23.18■■□□□ 1.3
RAB28-203ENST00000338176 SLC39A11Q8N1S5 342 aa23.18■■□□□ 1.3
RAB28-203ENST00000338176 PGBD4Q96DM1 585 aa23.18■■□□□ 1.3
RAB28-203ENST00000338176 NXF3Q9H4D5 531 aaKnown RBP23.18■■□□□ 1.3
RAB28-203ENST00000338176 RSAD1Q9HA92 442 aa23.18■■□□□ 1.3
RAB28-203ENST00000338176 NCLP19338 710 aaKnown RBP23.17■■□□□ 1.3
RAB28-203ENST00000338176 AXLP30530 894 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 NRIP1P48552 1158 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 RBM10P98175 930 aaKnown RBP23.17■■□□□ 1.3
RAB28-203ENST00000338176 SF3A1Q15459 793 aaKnown RBP23.17■■□□□ 1.3
RAB28-203ENST00000338176 CLUL1Q15846 466 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 CTC1Q2NKJ3 1217 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 PLPP4Q5VZY2 271 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 BCL7CQ8WUZ0 217 aaPredicted RBP23.17■■□□□ 1.3
RAB28-203ENST00000338176 MRPS27Q92552 414 aaKnown RBP23.17■■□□□ 1.3
RAB28-203ENST00000338176 MRPL9Q9BYD2 267 aaKnown RBP23.17■■□□□ 1.3
RAB28-203ENST00000338176 SPG21Q9NZD8 308 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 CLIC4Q9Y696 253 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 STK24Q9Y6E0 443 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 DDHD2O94830 711 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 NPTXRO95502 500 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 POMCP01189 267 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 PLCB3Q01970 1234 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 UBE3AQ05086 875 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 RESTQ13127 1097 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 CSPP1Q1MSJ5 1256 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 LEXMQ3ZCV2 418 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 ARL6IP4Q66PJ3 421 aaKnown RBP23.17■■□□□ 1.3
RAB28-203ENST00000338176 DAW1Q8N136 415 aa23.17■■□□□ 1.3
RAB28-203ENST00000338176 FSCN2O14926 492 aa23.16■■□□□ 1.3
RAB28-203ENST00000338176 TBX10O75333 385 aa23.16■■□□□ 1.3
RAB28-203ENST00000338176 ITGA4P13612 1032 aa23.16■■□□□ 1.3
RAB28-203ENST00000338176 RNASELQ05823 741 aaKnown RBP23.16■■□□□ 1.3
RAB28-203ENST00000338176 PCBP1Q15365 356 aaKnown RBP eCLIP23.16■■□□□ 1.3
RAB28-203ENST00000338176 ZBTB8OSQ8IWT0 167 aa23.16■■□□□ 1.3
RAB28-203ENST00000338176 DEPTORQ8TB45 409 aa23.16■■□□□ 1.3
RAB28-203ENST00000338176 LRRC15Q8TF66 581 aa23.16■■□□□ 1.3
RAB28-203ENST00000338176 INTS4Q96HW7 963 aaKnown RBP23.16■■□□□ 1.3
RAB28-203ENST00000338176 CCDC113Q9H0I3 377 aa23.16■■□□□ 1.3
RAB28-203ENST00000338176 FZD8Q9H461 694 aa23.16■■□□□ 1.3
RAB28-203ENST00000338176 MIOSQ9NXC5 875 aa23.16■■□□□ 1.3
RAB28-203ENST00000338176 IL9P15248 144 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 PDCP20941 246 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 AKAP5P24588 427 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 NAMPTP43490 491 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 SLC11A1P49279 550 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 NCBP1Q09161 790 aaKnown RBP23.15■■□□□ 1.3
RAB28-203ENST00000338176 RAD51AP2Q09MP3 1159 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 HYIQ5T013 277 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 RINT1Q6NUQ1 792 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 ZFP42Q96MM3 310 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 GAD1Q99259 594 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 MTMR6Q9Y217 621 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 NCOR1O75376 2440 aa23.15■■□□□ 1.3
RAB28-203ENST00000338176 A0A1B0GUA9 196 aa23.14■■□□□ 1.3
RAB28-203ENST00000338176 HIDE1A8MVS5 230 aa23.14■■□□□ 1.3
RAB28-203ENST00000338176 HIP1RO75146 1068 aa23.14■■□□□ 1.3
RAB28-203ENST00000338176 SSBP05455 408 aaKnown RBP eCLIP23.14■■□□□ 1.3
RAB28-203ENST00000338176 PRKCBP05771 671 aa23.14■■□□□ 1.3
RAB28-203ENST00000338176 GALTP07902 379 aa23.14■■□□□ 1.3
RAB28-203ENST00000338176 ALDH7A1P49419 539 aaKnown RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms