RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SF3A3Q12874 501 aaKnown RBP eCLIP9.59□□□□□ -0.87
SNCA-201ENST00000336904 GPS2Q13227 327 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 MESDQ14696 234 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 SNRNP35Q16560 246 aaKnown RBP9.59□□□□□ -0.87
SNCA-201ENST00000336904 DCAF12L1Q5VU92 463 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 SLC39A4Q6P5W5 647 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 ARHGAP27Q6ZUM4 889 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 RNF10Q8N5U6 811 aaKnown RBP9.59□□□□□ -0.87
SNCA-201ENST00000336904 XXYLT1Q8NBI6 393 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 MTMR14Q8NCE2 650 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 LMO3Q8TAP4 145 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 KRT35Q92764 455 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 PCDHB18PQ96TA0 734 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 KMT5AQ9NQR1 393 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 ANKFY1Q9P2R3 1169 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 ZNF214Q9UL59 606 aaPredicted RBP9.59□□□□□ -0.87
SNCA-201ENST00000336904 POLR2AP24928 1970 aaKnown RBP9.59□□□□□ -0.87
SNCA-201ENST00000336904 COL11A1P12107 1806 aaPredicted RBP9.59□□□□□ -0.87
SNCA-201ENST00000336904 PSME4Q14997 1843 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 COL2A1P02458 1487 aaPredicted RBP9.59□□□□□ -0.87
SNCA-201ENST00000336904 WDR64B1ANS9 1081 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 KRIT1O00522 736 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 TTI1O43156 1089 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 FGGP02679 453 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 FTLP02792 175 aaPredicted RBP9.58□□□□□ -0.88
SNCA-201ENST00000336904 KRT5P13647 590 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 CNGA1P29973 690 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 MXI1P50539 228 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 ERVK-9P63128 1117 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 FAM182AQ5T1J6 154 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 FKBP1CQ5VVH2 108 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 VPS36Q86VN1 386 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 TRIM50Q86XT4 487 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 PASD1Q8IV76 773 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 SCYL3Q8IZE3 742 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 USP38Q8NB14 1042 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 PPP1R13LQ8WUF5 828 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 LPAR1Q92633 364 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 KREMEN1Q96MU8 473 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 ACCSQ96QU6 501 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 TRIM7Q9C029 511 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 ERVK-5Q9HDB9 667 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 CTTNBP2NLQ9P2B4 639 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 DDNO94850 711 aaPredicted RBP9.58□□□□□ -0.88
SNCA-201ENST00000336904 FERP16591 822 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 PSMC5P62195 406 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 PRKCEQ02156 737 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 TRAF1Q13077 416 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 DRP2Q13474 957 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 MAP9Q49MG5 647 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 STXBP4Q6ZWJ1 553 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 NOP9Q86U38 636 aaKnown RBP9.58□□□□□ -0.88
SNCA-201ENST00000336904 UHMK1Q8TAS1 419 aaKnown RBP9.58□□□□□ -0.88
SNCA-201ENST00000336904 CTNNBL1Q8WYA6 563 aaPredicted RBP9.58□□□□□ -0.88
SNCA-201ENST00000336904 GLG1Q92896 1179 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 FAM118BQ9BPY3 351 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 STK33Q9BYT3 514 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 KIAA1217Q5T5P2 1943 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 TTLL13PA6NNM8 815 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 GJB6O95452 261 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 PGK2P07205 417 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 GJB1P08034 283 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 DMP1Q13316 513 aaPredicted RBP9.58□□□□□ -0.88
SNCA-201ENST00000336904 UBAP2Q5T6F2 1119 aaKnown RBP9.58□□□□□ -0.88
SNCA-201ENST00000336904 TMEM161BQ8NDZ6 487 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 ALG3Q92685 438 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 FAM212AQ96EL1 285 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 ZIM3Q96PE6 472 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 TBX20Q9UMR3 447 aa9.58□□□□□ -0.88
SNCA-201ENST00000336904 KIF13BQ9NQT8 1826 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 TCRBV7S2A1N4TA0A589 114 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 TARSL2A2RTX5 802 aaKnown RBP9.57□□□□□ -0.88
SNCA-201ENST00000336904 LRRIQ4A6NIV6 560 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 DAPK3O43293 454 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 GJC1P36383 396 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 ZNF280AP59817 542 aaPredicted RBP9.57□□□□□ -0.88
SNCA-201ENST00000336904 ACTR2P61160 394 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 NT5DC3Q86UY8 548 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 ANKRD35Q8N283 1001 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 CLMNQ96JQ2 1002 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 RPGRIP1Q96KN7 1286 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 STRA6Q9BX79 667 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 POLR3FQ9H1D9 316 aaPredicted RBP9.57□□□□□ -0.88
SNCA-201ENST00000336904 XPNPEP1Q9NQW7 623 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 SEL1LQ9UBV2 794 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 LCMT1Q9UIC8 334 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 SART1O43290 800 aaKnown RBP9.57□□□□□ -0.88
SNCA-201ENST00000336904 CSDE1O75534 798 aaKnown RBP9.57□□□□□ -0.88
SNCA-201ENST00000336904 EDN1P05305 212 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 CFHP08603 1231 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 CCND2P30279 289 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 PRKCIP41743 596 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 MAP3K10Q02779 954 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 MKRN3Q13064 507 aaKnown RBP9.57□□□□□ -0.88
SNCA-201ENST00000336904 ZSCAN26Q16670 478 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 FOXR2Q6PJQ5 311 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 GADL1Q6ZQY3 521 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 VSIG10LQ86VR7 867 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 AGPAT1Q99943 283 aa9.57□□□□□ -0.88
SNCA-201ENST00000336904 MOV10L1Q9BXT6 1211 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms