RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CCDC127Q96BQ5 260 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 FAM167BQ9BTA0 163 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 ALG6Q9Y672 507 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 MYO3BQ8WXR4 1341 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 BTNL10A8MVZ5 291 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 FSBPO95073 299 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 GKAP1Q5VSY0 366 aaPredicted RBP17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 NSMCE1Q8WV22 266 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 NACC1Q96RE7 527 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 PSMD1Q99460 953 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 AGPAT3Q9NRZ7 376 aa17.8■□□□□ 0.44
CDC42EP4-201ENST00000335793 TISP43B9A030 160 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 CES2O00748 559 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 RGS16O15492 202 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 ATMINO43313 823 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 VIMP08670 466 aaKnown RBP17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 RPUSD2Q8IZ73 545 aaKnown RBP17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 SLC20A1Q8WUM9 679 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 POLR3CQ9BUI4 534 aaPredicted RBP17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 L3MBTL1Q9Y468 752 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 CLRN2A0PK11 232 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 GOLGA8IPA6NC78 632 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 GOLGA8JA6NMD2 632 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 TMEM253P0C7T8 217 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 ECHS1P30084 290 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 CAPRIN2Q6IMN6 1127 aaKnown RBP17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 HOOK3Q86VS8 718 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 RAPGEF5Q92565 580 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 STAMBPL1Q96FJ0 436 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 CNOT8Q9UFF9 292 aaKnown RBP17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 FAM198AQ9UFP1 575 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 VAV3Q9UKW4 847 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 EMSYQ7Z589 1322 aa17.79■□□□□ 0.44
CDC42EP4-201ENST00000335793 POLRMTO00411 1230 aaKnown RBP17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 ALDH1B1P30837 517 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 RPS6KA3P51812 740 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 SPRED3Q2MJR0 410 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 SEL1L2Q5TEA6 688 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 OTOP1Q7RTM1 612 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 ZNF720Q7Z2F6 126 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 TRIM74Q86UV6 250 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 TRIM73Q86UV7 250 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 FBXO25Q8TCJ0 367 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 C18orf8Q96DM3 657 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 HES6Q96HZ4 224 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 OLFML3Q9NRN5 406 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 MAST2Q6P0Q8 1798 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 SMTNP53814 917 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 JAM2P57087 298 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 WLSQ5T9L3 541 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 SIAH1Q8IUQ4 282 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 MKL1Q969V6 931 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 ERP44Q9BS26 406 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 LXNQ9BS40 222 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 ERVK-5Q9HDB9 667 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 MTRF1LQ9UGC7 380 aaKnown RBP17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 PRELPP51888 382 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 NEK9Q8TD19 979 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 MGARPQ8TDB4 240 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 WDR18Q9BV38 432 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 ACP6Q9NPH0 428 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 TMOD2Q9NZR1 351 aa17.78■□□□□ 0.44
CDC42EP4-201ENST00000335793 TNRC6CQ9HCJ0 1690 aaKnown RBP17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 ANKRD62A6NC57 917 aa17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 HIP1RO75146 1068 aa17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 ECEL1O95672 775 aa17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 PMS2P54278 862 aa17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 BFSP1Q12934 665 aa17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 PPP1R7Q15435 360 aa17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 QPCTQ16769 361 aa17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 NSMFQ6X4W1 530 aa17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 PNMA8AQ86V59 439 aaPredicted RBP17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 ZC3H3Q8IXZ2 948 aaKnown RBP17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 AGPAT1Q99943 283 aa17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 TMEM165Q9HC07 324 aa17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 INTUQ9ULD6 942 aa17.77■□□□□ 0.44
CDC42EP4-201ENST00000335793 A0A0A6YYK5 440 aaPredicted RBP17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 ARP10275 920 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 KCNJ1P48048 391 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 PHLDB3Q6NSJ2 640 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 C1orf186Q6ZWK4 172 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 SH3BP5LQ7L8J4 393 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 PHLDB2Q86SQ0 1253 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 JAMLQ86YT9 394 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 CPXCR1Q8N123 301 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 ACER1Q8TDN7 264 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 ELMO3Q96BJ8 720 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 SEC16BQ96JE7 1060 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 MBOAT7Q96N66 472 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 VCPKMTQ9H867 229 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 ARHGEF10LQ9HCE6 1279 aa17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 LARSQ9P2J5 1176 aaKnown RBP17.77■□□□□ 0.43
CDC42EP4-201ENST00000335793 A0A1W2PRG0 241 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 SHBGP04278 402 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 DLG4P78352 724 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 SLC29A2Q14542 456 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 KIAA1755Q5JYT7 1200 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 ZFYVE27Q5T4F4 411 aa17.76■□□□□ 0.43
CDC42EP4-201ENST00000335793 PODNQ7Z5L7 613 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms