RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 RBM17Q96I25 401 aaKnown RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 PRMT1Q99873 361 aaKnown RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 TMEM161AQ9NX61 479 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 IPPQ9Y573 584 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 PRAG1Q86YV5 1406 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 TRAPPC8Q9Y2L5 1435 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 RNF103O00237 685 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 ANXA1P04083 346 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 APOA4P06727 396 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 CNDP1Q96KN2 507 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 FAM129AQ9BZQ8 928 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 MYBL1P10243 752 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 PLEKHA7Q6IQ23 1121 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 PROM2Q8N271 834 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 STAG2Q8N3U4 1231 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 PIGUQ9H490 435 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 PCDHGB4Q9UN71 923 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 hCG_1984214I3L0E3 225 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 VAMP4O75379 141 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 ABL1P00519 1130 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 CFBP00751 764 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 ALBP02768 609 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 BRAFP15056 766 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 CTDSPL2Q05D32 466 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 ITPRIPL1Q6GPH6 555 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 SMCR8Q8TEV9 937 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 JDP2Q8WYK2 163 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 C14orf93Q9H972 538 aaKnown RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 CDY2AQ9Y6F7 541 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 CDY1Q9Y6F8 540 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 POLR2MP0CAP2 368 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 MDH1P40925 334 aaKnown RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 NSUN2Q08J23 767 aaKnown RBP eCLIP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 IDI1Q13907 227 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 COG2Q14746 738 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 STAT4Q14765 748 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 OLFML1Q6UWY5 402 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 DDIASQ8IXT1 998 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 BTN2A2Q8WVV5 523 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 SMARCAD1Q9H4L7 1026 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 RGL1Q9NZL6 768 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 SGSM1Q2NKQ1 1148 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 TRIQKQ629K1 86 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 CHURC1Q8WUH1 139 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 PDCD10Q9BUL8 212 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 TEKT3Q9BXF9 490 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 MLXIPLQ9NP71 852 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 ABHD10Q9NUJ1 306 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 KIAA1024Q9UPX6 916 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 ABCC10Q5T3U5 1492 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 FAM47DPA6NHR8 397 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 NAALADL2Q58DX5 795 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 ARMC4Q5T2S8 1044 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 KRT74Q7RTS7 529 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 DENND6AQ8IWF6 608 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 FAM162AQ96A26 154 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 MYL10Q9BUA6 226 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 SPATA2Q9UM82 520 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 TMA7Q9Y2S6 64 aaKnown RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 STON1Q9Y6Q2 735 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 COL17A1Q9UMD9 1497 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 LRRIQ4A6NIV6 560 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 IGF2BP3O00425 579 aaKnown RBP eCLIP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 TRIM66O15016 1216 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 GUCA1CO95843 209 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 FOSP01100 380 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 ATP6V1B1P15313 513 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 USP14P54578 494 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 CROCCP3Q8IVE0 287 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 CHAMP1Q96JM3 812 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 CEP72Q9P209 647 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 LGALS16A8MUM7 142 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 UBAP1LF5GYI3 381 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 TAF4O00268 1085 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 PDE9AO76083 593 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 GPS1Q13098 491 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 BYSLQ13895 437 aaKnown RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 MXD4Q14582 209 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 PPP4R4Q6NUP7 873 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 FANCBQ8NB91 859 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 ZNF473Q8WTR7 871 aaKnown RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 CNPY3Q9BT09 278 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 FHDC1Q9C0D6 1143 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 OSBPL5Q9H0X9 879 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 KRCC1Q9NPI7 259 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 FAM153AQ9UHL3 310 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 MRPL11Q9Y3B7 192 aaKnown RBP6.53□□□□□ -1.36
CSMD1-201ENST00000335551 UBN2Q6ZU65 1347 aa6.53□□□□□ -1.36
CSMD1-201ENST00000335551 IL2RBP14784 551 aa6.52□□□□□ -1.36
CSMD1-201ENST00000335551 KIAA1755Q5JYT7 1200 aa6.52□□□□□ -1.36
CSMD1-201ENST00000335551 MFN1Q8IWA4 741 aa6.52□□□□□ -1.36
CSMD1-201ENST00000335551 FAM149B1Q96BN6 582 aa6.52□□□□□ -1.36
CSMD1-201ENST00000335551 OSBPL8Q9BZF1 889 aa6.52□□□□□ -1.36
CSMD1-201ENST00000335551 WNT8AQ9H1J5 351 aa6.52□□□□□ -1.36
CSMD1-201ENST00000335551 RANBP17Q9H2T7 1088 aaKnown RBP6.52□□□□□ -1.36
CSMD1-201ENST00000335551 UBE2TQ9NPD8 197 aaPredicted RBP6.52□□□□□ -1.36
CSMD1-201ENST00000335551 PCDHA5Q9Y5H7 936 aa6.52□□□□□ -1.36
CSMD1-201ENST00000335551 CFAP99D6REC4 459 aa6.52□□□□□ -1.37
CSMD1-201ENST00000335551 E5RI56 91 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms