RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 GPRC5CQ9NQ84 441 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 CHORDC1Q9UHD1 332 aaPredicted RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 NAGPAQ9UK23 515 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 SNUPNO95149 360 aaKnown RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 DLG4P78352 724 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 PPP2R5CQ13362 524 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 FAM133BQ5BKY9 247 aaKnown RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 ZNF720Q7Z2F6 126 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 CACNA2D3Q8IZS8 1091 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 PRCCQ92733 491 aaPredicted RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 FIZ1Q96SL8 496 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 PLCD4Q9BRC7 762 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 NUCKS1Q9H1E3 243 aaKnown RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 FOXR2Q6PJQ5 311 aa15□□□□□ -0.01
SF1-202ENST00000334944 CPLX4Q7Z7G2 160 aa15□□□□□ -0.01
SF1-202ENST00000334944 GLYCTKQ8IVS8 523 aa15□□□□□ -0.01
SF1-202ENST00000334944 DAW1Q8N136 415 aa15□□□□□ -0.01
SF1-202ENST00000334944 MDM1Q8TC05 714 aa15□□□□□ -0.01
SF1-202ENST00000334944 SYN2Q92777 582 aaPredicted RBP15□□□□□ -0.01
SF1-202ENST00000334944 AP1M1Q9BXS5 423 aa15□□□□□ -0.01
SF1-202ENST00000334944 CNOT8Q9UFF9 292 aaKnown RBP15□□□□□ -0.01
SF1-202ENST00000334944 KCNA3P22001 575 aa15□□□□□ -0.01
SF1-202ENST00000334944 SP4Q02446 784 aa15□□□□□ -0.01
SF1-202ENST00000334944 NIM1KQ8IY84 436 aa15□□□□□ -0.01
SF1-202ENST00000334944 C3orf20Q8ND61 904 aa15□□□□□ -0.01
SF1-202ENST00000334944 WNK4Q96J92 1243 aa15□□□□□ -0.01
SF1-202ENST00000334944 TEKT3Q9BXF9 490 aa15□□□□□ -0.01
SF1-202ENST00000334944 AGPAT3Q9NRZ7 376 aa15□□□□□ -0.01
SF1-202ENST00000334944 ZNF536O15090 1300 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 ZNF646O15015 1829 aaPredicted RBP14.99□□□□□ -0.01
SF1-202ENST00000334944 K7ENM7 598 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 MGRN1O60291 552 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 EXOC3O60645 756 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 HLTFQ14527 1009 aaKnown RBP eCLIP14.99□□□□□ -0.01
SF1-202ENST00000334944 PADI6Q6TGC4 694 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 MIER3Q7Z3K6 550 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 CCDC50Q8IVM0 306 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 KCNV2Q8TDN2 545 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 FAM84AQ96KN4 292 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 NACC1Q96RE7 527 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 PAGR1Q9BTK6 254 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 LRRC4CQ9HCJ2 640 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 TUFT1Q9NNX1 390 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 OLFML3Q9NRN5 406 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 HGSO14964 777 aaPredicted RBP14.99□□□□□ -0.01
SF1-202ENST00000334944 PSMC2P35998 433 aaKnown RBP14.99□□□□□ -0.01
SF1-202ENST00000334944 SPP2Q13103 211 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 RBBP5Q15291 538 aaKnown RBP14.99□□□□□ -0.01
SF1-202ENST00000334944 CFAP221Q4G0U5 840 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 HS2ST1Q7LGA3 356 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 PALB2Q86YC2 1186 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 RNF10Q8N5U6 811 aaKnown RBP14.99□□□□□ -0.01
SF1-202ENST00000334944 MAB21L3Q8N8X9 362 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 AGAP11Q8TF27 550 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 KIFC3Q9BVG8 833 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 OSGEPQ9NPF4 335 aa14.99□□□□□ -0.01
SF1-202ENST00000334944 GOLGA8IPA6NC78 632 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 GOLGA8JA6NMD2 632 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 DDX3XO00571 662 aaKnown RBP eCLIP14.98□□□□□ -0.016e-44■■■■□ 22.7
SF1-202ENST00000334944 EVI5O60447 810 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 FLOT1O75955 427 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 SOX10P56693 466 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 SLC8A3P57103 927 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 BMT2Q1RMZ1 405 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 NSMFQ6X4W1 530 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 SAMD7Q7Z3H4 446 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 DDX42Q86XP3 938 aaKnown RBP eCLIP14.98□□□□□ -0.01
SF1-202ENST00000334944 TAAR1Q96RJ0 339 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 MXRA8Q9BRK3 442 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 LUC7LQ9NQ29 371 aaKnown RBP14.98□□□□□ -0.01
SF1-202ENST00000334944 DNAJC12Q9UKB3 198 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 C15orf41Q9Y2V0 281 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 ANKRD33BA6NCL7 494 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 CEP104O60308 925 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 PYGLP06737 847 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 FMO5P49326 533 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 RWDD2BP57060 319 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 DRAP1Q14919 205 aaPredicted RBP14.98□□□□□ -0.01
SF1-202ENST00000334944 UGCGQ16739 394 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 MEI1Q5TIA1 1274 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 PLA2G4FQ68DD2 849 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 MIS18BP1Q6P0N0 1132 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 ADAT2Q7Z6V5 191 aaKnown RBP14.98□□□□□ -0.01
SF1-202ENST00000334944 CASKIN2Q8WXE0 1202 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 RAPGEF5Q92565 580 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 CAMKK2Q96RR4 588 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 CBWD1Q9BRT8 395 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 ZNRF3Q9ULT6 936 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 A8MUI8 341 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 ATP9AO75110 1047 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 GAP43P17677 238 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 NPEPPSP55786 919 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 MRPS9P82933 396 aaKnown RBP14.98□□□□□ -0.01
SF1-202ENST00000334944 XRCC4Q13426 336 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 RTKN2Q8IZC4 609 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 CAVIN3Q969G5 261 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 METTL14Q9HCE5 456 aaKnown RBP14.98□□□□□ -0.01
SF1-202ENST00000334944 ACP6Q9NPH0 428 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 PLCB1Q9NQ66 1216 aa14.98□□□□□ -0.01
SF1-202ENST00000334944 TAS2R14Q9NYV8 317 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms