RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 RPS6KA2Q15349 733 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 AFG1LQ8WV93 481 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 DPF2Q92785 391 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 CPA4Q9UI42 421 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 TRAPPC3O43617 180 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 RNF40O75150 1001 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 GSTA1P08263 222 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 GSTA2P09210 222 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 SNX9Q9Y5X1 595 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 CPT1AP50416 773 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 C2orf54Q08AI8 447 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 CCDC62Q6P9F0 684 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 RNF180Q86T96 592 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 KSR1Q8IVT5 923 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 REREQ9P2R6 1566 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 DPYSL4O14531 572 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 FGGP02679 453 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 SHMT1P34896 483 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 FXR2P51116 673 aaKnown RBP eCLIP16.06■□□□□ 0.16
C9orf47-201ENST00000334490 ZC2HC1CQ53FD0 456 aaPredicted RBP16.06■□□□□ 0.16
C9orf47-201ENST00000334490 FAM117BQ6P1L5 589 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 LRRC31Q6UY01 552 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 ADSSL1Q8N142 457 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 PGBD4Q96DM1 585 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 TNIP3Q96KP6 325 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 PCSK1NQ9UHG2 260 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 KIF20BQ96Q89 1820 aa16.06■□□□□ 0.16
C9orf47-201ENST00000334490 RHOBTB3O94955 611 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 FTLP02792 175 aaPredicted RBP16.05■□□□□ 0.16
C9orf47-201ENST00000334490 C1orf228Q6PIY5 440 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 SMYD2Q9NRG4 433 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 ATP8A1Q9Y2Q0 1164 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 DISP2A7MBM2 1401 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 TCRBV5S4A2TA0A5A2 114 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 TFDP2Q14188 446 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 SEC23AQ15436 765 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 APOBEC3HQ6NTF7 200 aaKnown RBP16.05■□□□□ 0.16
C9orf47-201ENST00000334490 CATSPER3Q86XQ3 398 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 GLYCTKQ8IVS8 523 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 GMCL1P1Q8NEA9 526 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 ANKEF1Q9NU02 776 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 RRN3P2A6NIE6 340 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 ADM5C9JUS6 153 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 SLC26A4O43511 780 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 PALMO75781 387 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 CIB2O75838 187 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 MYBP10242 640 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 DPYDQ12882 1025 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 GKAP1Q5VSY0 366 aaPredicted RBP16.05■□□□□ 0.16
C9orf47-201ENST00000334490 RAPH1Q70E73 1250 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 MIF4GDA9UHW6 222 aaKnown RBP16.05■□□□□ 0.16
C9orf47-201ENST00000334490 TROVE2P10155 538 aaKnown RBP eCLIP16.05■□□□□ 0.16
C9orf47-201ENST00000334490 RBP5P82980 135 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 SEPT6Q14141 434 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 BBS9Q3SYG4 887 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 DAGLBQ8NCG7 672 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 HEMGNQ9BXL5 484 aa16.05■□□□□ 0.16
C9orf47-201ENST00000334490 DDX4Q9NQI0 724 aaKnown RBP16.05■□□□□ 0.16
C9orf47-201ENST00000334490 MAP3K20Q9NYL2 800 aaKnown RBP16.05■□□□□ 0.16
C9orf47-201ENST00000334490 SLC37A4O43826 429 aa16.04■□□□□ 0.16
C9orf47-201ENST00000334490 SNRNP35Q16560 246 aaKnown RBP16.04■□□□□ 0.16
C9orf47-201ENST00000334490 RDM1Q8NG50 284 aa16.04■□□□□ 0.16
C9orf47-201ENST00000334490 CCHCR1Q8TD31 782 aa16.04■□□□□ 0.16
C9orf47-201ENST00000334490 WTIPA6NIX2 430 aaPredicted RBP16.04■□□□□ 0.16
C9orf47-201ENST00000334490 PPFIA4O75335 1185 aa16.04■□□□□ 0.16
C9orf47-201ENST00000334490 TJP3O95049 919 aa16.04■□□□□ 0.16
C9orf47-201ENST00000334490 ATP1A2P50993 1020 aa16.04■□□□□ 0.16
C9orf47-201ENST00000334490 GANCQ8TET4 914 aa16.04■□□□□ 0.16
C9orf47-201ENST00000334490 RBM41Q96IZ5 413 aaKnown RBP16.04■□□□□ 0.16
C9orf47-201ENST00000334490 NLRP11P59045 1033 aaKnown RBP16.04■□□□□ 0.16
C9orf47-201ENST00000334490 TMEM132DQ14C87 1099 aa16.04■□□□□ 0.16
C9orf47-201ENST00000334490 VEPH1Q14D04 833 aa16.04■□□□□ 0.16
C9orf47-201ENST00000334490 FAM102AQ5T9C2 384 aaPredicted RBP16.04■□□□□ 0.16
C9orf47-201ENST00000334490 STMN2Q93045 179 aa16.04■□□□□ 0.16
C9orf47-201ENST00000334490 LBHD1Q9BQE6 289 aaPredicted RBP16.04■□□□□ 0.16
C9orf47-201ENST00000334490 PRMT7Q9NVM4 692 aaPredicted RBP16.04■□□□□ 0.16
C9orf47-201ENST00000334490 LMCD1Q9NZU5 365 aa16.04■□□□□ 0.16
C9orf47-201ENST00000334490 NFIBO00712 420 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 ATF7IP2Q5U623 682 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 GDAP1Q8TB36 358 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.03■□□□□ 0.16
C9orf47-201ENST00000334490 TTC1Q99614 292 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 HEY1Q9Y5J3 304 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 TADA2AO75478 443 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 RNF219Q5W0B1 726 aaPredicted RBP16.03■□□□□ 0.16
C9orf47-201ENST00000334490 ZNF564Q8TBZ8 553 aaPredicted RBP16.03■□□□□ 0.16
C9orf47-201ENST00000334490 MCUR1Q96AQ8 359 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 FAM163AQ96GL9 167 aaPredicted RBP16.03■□□□□ 0.16
C9orf47-201ENST00000334490 IDI2Q9BXS1 227 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 AK9Q5TCS8 1911 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 RECQLP46063 649 aaPredicted RBP16.03■□□□□ 0.16
C9orf47-201ENST00000334490 TPD52P55327 224 aaPredicted RBP16.03■□□□□ 0.16
C9orf47-201ENST00000334490 THOC5Q13769 683 aaKnown RBP16.03■□□□□ 0.16
C9orf47-201ENST00000334490 CLEC17AQ6ZS10 378 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 NUP85Q9BW27 656 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 UNC45AQ9H3U1 944 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 A0A1W2PQC6 194 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 SLC16A3O15427 465 aaKnown RBP16.03■□□□□ 0.16
C9orf47-201ENST00000334490 CYP26A1O43174 497 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 MOCS2O96007 188 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms