RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TRIM33Q9UPN9 1127 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 MYH7P12883 1935 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 KLHL41O60662 606 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 IL12AP29459 219 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 DHX34Q14147 1143 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 BICRALQ6AI39 1079 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 NLRP10Q86W26 655 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 ADGRA2Q96PE1 1338 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZBTB43O43298 467 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 TIMM44O43615 452 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 ORC4O43929 436 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 RGS2P41220 211 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 EXOSC10Q01780 885 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 CLCA4Q14CN2 919 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 AARS2Q5JTZ9 985 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SEL1L2Q5TEA6 688 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 RFX8Q6ZV50 586 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 HELQQ8TDG4 1101 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 TOP1MTQ969P6 601 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 MMADHCQ9H3L0 296 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 PLEKHA4Q9H4M7 779 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 TAB2Q9NYJ8 693 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 ERAP1Q9NZ08 941 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 UVRAGQ9P2Y5 699 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 CSF1RP07333 972 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 KCNA6P17658 529 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 ATP8B2P98198 1209 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 STRN3Q13033 797 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 ART3Q13508 389 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 RPS6KA2Q15349 733 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 KIAA1841Q6NSI8 718 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 HDAC11Q96DB2 347 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZBTB10Q96DT7 871 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 STK17AQ9UEE5 414 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 PTPRCP08575 1304 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 M0R3G1 203 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 MEIS1O00470 390 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SRP54P61011 504 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 C1QBPQ07021 282 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 CDK13Q14004 1512 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 PACS1Q6VY07 963 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 NLRP14Q86W24 1093 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 FCHSD1Q86WN1 690 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 GAS2L2Q8NHY3 880 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 PHF21AQ96BD5 680 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 NARS2Q96I59 477 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 RERGLQ9H628 205 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 QPCTLQ9NXS2 382 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 MTRRQ9UBK8 725 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 ERBINQ96RT1 1412 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 TTC41PQ6P2S7 1318 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 DNM1LO00429 736 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 NUDT7P0C024 238 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 IFNA8P32881 189 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 EIF4A2Q14240 407 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 C5orf22Q49AR2 442 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 NAIF1Q69YI7 327 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SLC26A7Q8TE54 656 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 PFDN5Q99471 154 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 ING4Q9UNL4 249 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SH3BP1Q9Y3L3 701 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 COL4A3BPQ9Y5P4 624 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SLC4A4Q9Y6R1 1079 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SYNRGQ9UMZ2 1314 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 AGRPO00253 132 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 INPPL1O15357 1258 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 RPN2P04844 631 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 IL32P24001 234 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 CCT5P48643 541 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 UBASH3AP57075 661 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 GFPT1Q06210 699 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SSX2Q16385 188 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 ABCB5Q2M3G0 1257 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 CFAP70Q5T0N1 1121 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 PMF1Q6P1K2 205 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 UCMAQ8WVF2 138 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 PRPF18Q99633 342 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 VPS4AQ9UN37 437 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SLC9A8Q9Y2E8 581 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SIK3Q9Y2K2 1263 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 PCDHGA1Q9Y5H4 931 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 PMF1-BGLAPU3KQ54 211 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 DUOX2Q9NRD8 1548 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 M0QZ92 97 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SNX4O95219 450 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 LAYNQ6UX15 382 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 DEF8Q6ZN54 512 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 MOB1BQ7L9L4 216 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 TAS2R42Q7RTR8 314 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 CORO2AQ92828 525 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 TTC7AQ9ULT0 858 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 RNMTO43148 476 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 XRCC6P12956 609 aaKnown RBP eCLIP6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 BARGINQ6ZT62 677 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 NT5DC3Q86UY8 548 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 COLGALT2Q8IYK4 626 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 IGSF22Q8N9C0 903 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 SETD6Q8TBK2 473 aa6.42□□□□□ -1.38
CDC42BPA-201ENST00000334218 TIAM1Q13009 1591 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms