RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 CPNE8Q86YQ8 564 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 RPUSD2Q8IZ73 545 aaKnown RBP20.49■□□□□ 0.87
RFTN1-201ENST00000334133 LMBR1Q8WVP7 490 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 BSNDQ8WZ55 320 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 RFFLQ8WZ73 363 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 AGPAT1Q99943 283 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 TMEM117Q9H0C3 514 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 TMEM206Q9H813 350 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 FTLP02792 175 aaPredicted RBP20.49■□□□□ 0.87
RFTN1-201ENST00000334133 ADSSP30520 456 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 FLT3P36888 993 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 GMPSP49915 693 aaPredicted RBP20.49■□□□□ 0.87
RFTN1-201ENST00000334133 HMGCS2P54868 508 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 SLC9A9Q8IVB4 645 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 ZNF233A6NK53 670 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 VWA5AO00534 786 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 DAPK3O43293 454 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 ZBED4O75132 1171 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 ACTRT1Q8TDG2 376 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 SEMA4DQ92854 862 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 GABBR1Q9UBS5 961 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 CYP26A1O43174 497 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 MXI1P50539 228 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 PIK3R5Q8WYR1 880 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 TBC1D22BQ9NU19 505 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 CTTNBP2NLQ9P2B4 639 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 SUCLA2Q9P2R7 463 aaPredicted RBP20.48■□□□□ 0.87
RFTN1-201ENST00000334133 DBR1Q9UK59 544 aaKnown RBP20.48■□□□□ 0.87
RFTN1-201ENST00000334133 DENND3A2RUS2 1198 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 TMEM253P0C7T8 217 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 MARCKSL1P49006 195 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 PSMC5P62195 406 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 SNRNP48Q6IEG0 339 aaKnown RBP20.48■□□□□ 0.87
RFTN1-201ENST00000334133 MAATS1Q7Z4T9 603 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 HES6Q96HZ4 224 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 BTBD6Q96KE9 485 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 TRIM51Q9BSJ1 452 aa20.48■□□□□ 0.87
RFTN1-201ENST00000334133 NFKBIEO00221 500 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 DLATP10515 647 aaKnown RBP20.47■□□□□ 0.87
RFTN1-201ENST00000334133 TNFRSF8P28908 595 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 NPTX2P47972 431 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 SLC47A2Q86VL8 602 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 DHX38Q92620 1227 aaKnown RBP20.47■□□□□ 0.87
RFTN1-201ENST00000334133 CEP170P1Q96L14 293 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 PCDHB18PQ96TA0 734 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 WDR64B1ANS9 1081 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 ZNF862O60290 1169 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 SNRNP35Q16560 246 aaKnown RBP20.47■□□□□ 0.87
RFTN1-201ENST00000334133 SYCE1Q8N0S2 351 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 ALG3Q92685 438 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 WRNIP1Q96S55 665 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 SH3GL2Q99962 352 aa20.47■□□□□ 0.87
RFTN1-201ENST00000334133 TAF1DQ9H5J8 278 aaPredicted RBP20.47■□□□□ 0.87
RFTN1-201ENST00000334133 A0A0A6YYK5 440 aaPredicted RBP20.46■□□□□ 0.87
RFTN1-201ENST00000334133 CTNND1O60716 968 aaKnown RBP20.46■□□□□ 0.87
RFTN1-201ENST00000334133 ECHS1P30084 290 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 GTF2BQ00403 316 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 CETN1Q12798 172 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 NNTQ13423 1086 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 EPC2Q52LR7 807 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 LMBRD2Q68DH5 695 aaPredicted RBP20.46■□□□□ 0.87
RFTN1-201ENST00000334133 SWSAP1Q6NVH7 229 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 RUBCNQ92622 972 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 KREMEN1Q96MU8 473 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 PI4K2AQ9BTU6 479 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 CNOT7Q9UIV1 285 aaKnown RBP20.46■□□□□ 0.87
RFTN1-201ENST00000334133 FER1L6Q2WGJ9 1857 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 OPA1O60313 960 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 NR3C2P08235 984 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 CNGA1P29973 690 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 MKRN4PQ13434 485 aaPredicted RBP20.46■□□□□ 0.87
RFTN1-201ENST00000334133 KIF22Q14807 665 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 DALRD3Q5D0E6 543 aaKnown RBP20.46■□□□□ 0.87
RFTN1-201ENST00000334133 PHLDB2Q86SQ0 1253 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 NOP9Q86U38 636 aaKnown RBP20.46■□□□□ 0.87
RFTN1-201ENST00000334133 NLRX1Q86UT6 975 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 IQCKQ8N0W5 287 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 KRT35Q92764 455 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 ERVK-5Q9HDB9 667 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 DDX3YO15523 660 aaKnown RBP20.46■□□□□ 0.87
RFTN1-201ENST00000334133 PPATQ06203 517 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 TNFAIP1Q13829 316 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 MESDQ14696 234 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 ALS2CLQ60I27 953 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 DLK2Q6UY11 383 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 NIPA1Q7RTP0 329 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 C4orf19Q8IY42 314 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 INTUQ9ULD6 942 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 TBX20Q9UMR3 447 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 PLAAQ9Y263 795 aa20.46■□□□□ 0.87
RFTN1-201ENST00000334133 GNGT1P63211 74 aa20.45■□□□□ 0.86
RFTN1-201ENST00000334133 TMEM161BQ8NDZ6 487 aa20.45■□□□□ 0.86
RFTN1-201ENST00000334133 GLG1Q92896 1179 aa20.45■□□□□ 0.86
RFTN1-201ENST00000334133 RNPC3Q96LT9 517 aaKnown RBP20.45■□□□□ 0.86
RFTN1-201ENST00000334133 KMT5AQ9NQR1 393 aa20.45■□□□□ 0.86
RFTN1-201ENST00000334133 TRIM66O15016 1216 aa20.45■□□□□ 0.86
RFTN1-201ENST00000334133 MMEP08473 750 aa20.45■□□□□ 0.86
RFTN1-201ENST00000334133 ANXA13P27216 316 aa20.45■□□□□ 0.86
RFTN1-201ENST00000334133 IRAK1P51617 712 aa20.45■□□□□ 0.86
RFTN1-201ENST00000334133 PPFIA1Q13136 1202 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms