RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 EMSYQ7Z589 1322 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 TMEM150BA6NC51 233 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 HIP1RO75146 1068 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 FTLP02792 175 aaPredicted RBP13.31□□□□□ -0.28
VPS33B-201ENST00000333371 GCLMP48507 274 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 PPP3CAQ08209 521 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 BFSP1Q12934 665 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 MCTP2Q6DN12 878 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 ZDHHC24Q6UX98 284 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 MICALCLQ6ZW33 695 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 JAMLQ86YT9 394 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 LMO3Q8TAP4 145 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 SEC16BQ96JE7 1060 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 PSMD1Q99460 953 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 TXLNGYQ9BZA5 131 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 CD248Q9HCU0 757 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 DMAC2Q9NW81 257 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 PSME4Q14997 1843 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 SPDYE2BA6NHP3 402 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 PPFIA2O75334 1257 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 CYP3A4P08684 503 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 SPDYE6P0CI01 402 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 VCAM1P19320 739 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 IBSPP21815 317 aaPredicted RBP13.31□□□□□ -0.28
VPS33B-201ENST00000333371 SLCO1A2P46721 670 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 ACTN3Q08043 901 aaPredicted RBP13.31□□□□□ -0.28
VPS33B-201ENST00000333371 AGBL2Q5U5Z8 902 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 TTC27Q6P3X3 843 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 IPO4Q8TEX9 1081 aaKnown RBP13.31□□□□□ -0.28
VPS33B-201ENST00000333371 AGPAT1Q99943 283 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 LXNQ9BS40 222 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 MTFR1LQ9H019 292 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 VEZTQ9HBM0 779 aa13.31□□□□□ -0.28
VPS33B-201ENST00000333371 HERC5Q9UII4 1024 aaKnown RBP13.31□□□□□ -0.28
VPS33B-201ENST00000333371 ATXN2Q99700 1313 aaKnown RBP13.3□□□□□ -0.28
VPS33B-201ENST00000333371 ANKRD63C9JTQ0 380 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 ANXA13P27216 316 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 RPL21P46778 160 aaKnown RBP13.3□□□□□ -0.28
VPS33B-201ENST00000333371 PRELPP51888 382 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 IFI35P80217 286 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-201ENST00000333371 MESDQ14696 234 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 CABS1Q96KC9 395 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 SELENOSQ9BQE4 189 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 CBWD1Q9BRT8 395 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 CARD9Q9H257 536 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 SEMA4AQ9H3S1 761 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 VCPKMTQ9H867 229 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 ARHGEF10LQ9HCE6 1279 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 TUFT1Q9NNX1 390 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 PTPN22Q9Y2R2 807 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 ANKRD62A6NC57 917 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 K7ENM7 598 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 KIAA0391O15091 583 aaKnown RBP13.3□□□□□ -0.28
VPS33B-201ENST00000333371 CALCAP01258 141 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 FGFR4P22455 802 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 BAG6P46379 1132 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 KCNJ1P48048 391 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 MAPK7Q13164 816 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 SLC29A2Q14542 456 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 CCDC121Q6ZUS5 278 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 SPATS2Q86XZ4 545 aaKnown RBP13.3□□□□□ -0.28
VPS33B-201ENST00000333371 RPUSD2Q8IZ73 545 aaKnown RBP13.3□□□□□ -0.28
VPS33B-201ENST00000333371 PRELID2Q8N945 189 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 PLEKHO2Q8TD55 490 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 SLC5A5Q92911 643 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 PCDHB18PQ96TA0 734 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 ZNF577Q9BSK1 485 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 FBXO28Q9NVF7 368 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 ZNF70Q9UC06 446 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-201ENST00000333371 RGS17Q9UGC6 210 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-201ENST00000333371 ZBTB21Q9ULJ3 1066 aa13.3□□□□□ -0.28
VPS33B-201ENST00000333371 TTC7AQ9ULT0 858 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-201ENST00000333371 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-201ENST00000333371 GOLGA8IPA6NC78 632 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 GOLGA8JA6NMD2 632 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 DPEP1P16444 411 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 STAT2P52630 851 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 PMS2P54278 862 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 NBPF9Q3BBW0 867 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 YTHDF3Q7Z739 585 aaKnown RBP13.29□□□□□ -0.28
VPS33B-201ENST00000333371 FAM84AQ96KN4 292 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 POP1Q99575 1024 aaKnown RBP13.29□□□□□ -0.28
VPS33B-201ENST00000333371 RAB17Q9H0T7 212 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 AZI2Q9H6S1 392 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 COL2A1P02458 1487 aaPredicted RBP13.29□□□□□ -0.28
VPS33B-201ENST00000333371 GOLGA6L7A0A1B0GV03 622 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 SGPL1O95470 568 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 CHN1P15882 459 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 COMTP21964 271 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 ZNF131P52739 623 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 PPP2R5CQ13362 524 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 CCDC38Q502W7 563 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 CPLX4Q7Z7G2 160 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 TLCD1Q96CP7 247 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 MKNK1Q9BUB5 465 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 GRHL1Q9NZI5 618 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 RPTORQ8N122 1335 aa13.29□□□□□ -0.28
VPS33B-201ENST00000333371 CTNND1O60716 968 aaKnown RBP13.28□□□□□ -0.28
VPS33B-201ENST00000333371 VIL1P09327 827 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms