RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 LRRIQ4A6NIV6 560 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 H0YCG3 227 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 ENC1O14682 589 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 HNRNPDLO14979 420 aaKnown RBP19.45■□□□□ 0.7
ACTB-201ENST00000331789 PJA2O43164 708 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 SLC18A3Q16572 532 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 BRDTQ58F21 947 aaPredicted RBP19.45■□□□□ 0.7
ACTB-201ENST00000331789 PHLDB3Q6NSJ2 640 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 STK33Q9BYT3 514 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 MORF4L1Q9UBU8 362 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 LOC102724159A0A0B4J2E5 919 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 TADA3O75528 432 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 GFPT2O94808 682 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 TFRCP02786 760 aaKnown RBP19.45■□□□□ 0.7
ACTB-201ENST00000331789 STAT1P42224 750 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 GCLCP48506 637 aaPredicted RBP19.45■□□□□ 0.7
ACTB-201ENST00000331789 MCCD1P59942 119 aaPredicted RBP19.45■□□□□ 0.7
ACTB-201ENST00000331789 DRP2Q13474 957 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 TTLL4Q14679 1199 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 DRAP1Q14919 205 aaPredicted RBP19.45■□□□□ 0.7
ACTB-201ENST00000331789 PWP2Q15269 919 aaKnown RBP19.45■□□□□ 0.7
ACTB-201ENST00000331789 EPC2Q52LR7 807 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 DEPTORQ8TB45 409 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 CCDC127Q96BQ5 260 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 POP1Q99575 1024 aaKnown RBP19.45■□□□□ 0.7
ACTB-201ENST00000331789 TMEM117Q9H0C3 514 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 HDAC6Q9UBN7 1215 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 KCNG1Q9UIX4 513 aa19.45■□□□□ 0.7
ACTB-201ENST00000331789 N4BP1O75113 896 aaKnown RBP19.44■□□□□ 0.7
ACTB-201ENST00000331789 MAFO75444 373 aaPredicted RBP19.44■□□□□ 0.7
ACTB-201ENST00000331789 MOCS3O95396 460 aa19.44■□□□□ 0.7
ACTB-201ENST00000331789 ATP1A1P05023 1023 aaKnown RBP19.44■□□□□ 0.7
ACTB-201ENST00000331789 PRKCIP41743 596 aa19.44■□□□□ 0.7
ACTB-201ENST00000331789 NAMPTP43490 491 aa19.44■□□□□ 0.7
ACTB-201ENST00000331789 AMPD2Q01433 879 aa19.44■□□□□ 0.7
ACTB-201ENST00000331789 CST9Q5W186 159 aa19.44■□□□□ 0.7
ACTB-201ENST00000331789 BBXQ8WY36 941 aaPredicted RBP19.44■□□□□ 0.7
ACTB-201ENST00000331789 FAM167AQ96KS9 214 aa19.44■□□□□ 0.7
ACTB-201ENST00000331789 MFSD14AQ96MC6 490 aa19.44■□□□□ 0.7
ACTB-201ENST00000331789 FBXL18Q96ME1 805 aa19.44■□□□□ 0.7
ACTB-201ENST00000331789 GPR88Q9GZN0 384 aa19.44■□□□□ 0.7
ACTB-201ENST00000331789 APEX2Q9UBZ4 518 aa19.44■□□□□ 0.7
ACTB-201ENST00000331789 SALL4Q9UJQ4 1053 aa19.44■□□□□ 0.7
ACTB-201ENST00000331789 BZW2Q9Y6E2 419 aaKnown RBP19.44■□□□□ 0.7
ACTB-201ENST00000331789 F8VZ95 297 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 P4HA2O15460 535 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 GARTP22102 1010 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 SOX5P35711 763 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 PLCB4Q15147 1175 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 GJC2Q5T442 439 aaPredicted RBP19.43■□□□□ 0.7
ACTB-201ENST00000331789 TAPT1Q6NXT6 567 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 PLPPR4Q7Z2D5 763 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 PARD3BQ8TEW8 1205 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 SCFD2Q8WU76 684 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 DIS3Q9Y2L1 958 aaKnown RBP19.43■□□□□ 0.7
ACTB-201ENST00000331789 LRRIQ3A6PVS8 624 aaPredicted RBP19.43■□□□□ 0.7
ACTB-201ENST00000331789 ZBTB42B2RXF5 422 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 ZBTB48P10074 688 aaPredicted RBP19.43■□□□□ 0.7
ACTB-201ENST00000331789 FERP16591 822 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 LIG4P49917 911 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 MAP2K1Q02750 393 aaPredicted RBP19.43■□□□□ 0.7
ACTB-201ENST00000331789 STRN3Q13033 797 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 CAPSQ13938 189 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 ARHGAP44Q17R89 818 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 ARHGEF19Q8IW93 802 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 GPD1LQ8N335 351 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 FAM213AQ9BRX8 229 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 CAPN6Q9Y6Q1 641 aa19.43■□□□□ 0.7
ACTB-201ENST00000331789 EFCAB8A8MWE9 144 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 K7ERI5 159 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 ABCD1P33897 745 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 MXI1P50539 228 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 CYP24A1Q07973 514 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 CETN1Q12798 172 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 MKRN4PQ13434 485 aaPredicted RBP19.42■□□□□ 0.7
ACTB-201ENST00000331789 TUBB2AQ13885 445 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 ATP8B4Q8TF62 1192 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 PRPF31Q8WWY3 499 aaKnown RBP19.42■□□□□ 0.7
ACTB-201ENST00000331789 TUBB2BQ9BVA1 445 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 PACSIN1Q9BY11 444 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 SUGCTQ9HAC7 445 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 UBE2TQ9NPD8 197 aaPredicted RBP19.42■□□□□ 0.7
ACTB-201ENST00000331789 NMRK2Q9NPI5 230 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 TOPORSQ9NS56 1045 aaPredicted RBP19.42■□□□□ 0.7
ACTB-201ENST00000331789 PUF60Q9UHX1 559 aaKnown RBP19.42■□□□□ 0.7
ACTB-201ENST00000331789 IVNS1ABPQ9Y6Y0 642 aa19.42■□□□□ 0.7
ACTB-201ENST00000331789 STRNO43815 780 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 EVI5O60447 810 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 EDN1P05305 212 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 MAMDC4Q6UXC1 1216 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 GPR142Q7Z601 462 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 TMC2Q8TDI7 906 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 UBXN4Q92575 508 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 ZBTB45Q96K62 511 aaPredicted RBP19.41■□□□□ 0.7
ACTB-201ENST00000331789 HAPLN2Q9GZV7 340 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.41■□□□□ 0.76e-9■■■■■ 38.9
ACTB-201ENST00000331789 TACC1O75410 805 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 ARHGAP1Q07960 439 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 TRAPPC11Q7Z392 1133 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 DNAAF5Q86Y56 855 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms