RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 ZC3H11AO75152 810 aaKnown RBP eCLIP20.16■□□□□ 0.82
RAB28-202ENST00000330852 CBX2Q14781 532 aaPredicted RBP20.16■□□□□ 0.82
RAB28-202ENST00000330852 ANKRD54Q6NXT1 300 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 DDX53Q86TM3 631 aaKnown RBP20.16■□□□□ 0.82
RAB28-202ENST00000330852 IGSF21Q96ID5 467 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 TUFT1Q9NNX1 390 aa20.16■□□□□ 0.82
RAB28-202ENST00000330852 C2orf71A6NGG8 1288 aa20.15■□□□□ 0.82
RAB28-202ENST00000330852 GALTP07902 379 aa20.15■□□□□ 0.82
RAB28-202ENST00000330852 NCLP19338 710 aaKnown RBP20.15■□□□□ 0.82
RAB28-202ENST00000330852 RARRES1P49788 294 aa20.15■□□□□ 0.82
RAB28-202ENST00000330852 AGMOQ6ZNB7 445 aa20.15■□□□□ 0.82
RAB28-202ENST00000330852 RNF135Q8IUD6 432 aa20.15■□□□□ 0.82
RAB28-202ENST00000330852 RSAD1Q9HA92 442 aa20.15■□□□□ 0.82
RAB28-202ENST00000330852 BMP2KQ9NSY1 1161 aaPredicted RBP20.15■□□□□ 0.82
RAB28-202ENST00000330852 RAPGEFL1Q9UHV5 662 aa20.15■□□□□ 0.82
RAB28-202ENST00000330852 FAM86C2PA6NEL3 165 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 ARL2P36404 184 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 TECP42680 631 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 FOSBP53539 338 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 TPRNQ4KMQ1 711 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 UBXN11Q5T124 520 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 NOTUMQ6P988 496 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 CCDC83Q8IWF9 413 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 VPS52Q8N1B4 723 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 FBXO18Q8NFZ0 1043 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 TMEM175Q9BSA9 504 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 S1PR5Q9H228 398 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 INPP5FQ9Y2H2 1132 aa20.14■□□□□ 0.81
RAB28-202ENST00000330852 MEIS3P2A8K0S8 358 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 NT5C1B-RDH14C9J2C7 533 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 WNT7AO00755 349 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 CXCL14O95715 111 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 MCM7P33993 719 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 RBM25P49756 843 aaKnown RBP20.13■□□□□ 0.81
RAB28-202ENST00000330852 POLR3CQ9BUI4 534 aaPredicted RBP20.13■□□□□ 0.81
RAB28-202ENST00000330852 ZBP1Q9H171 429 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 TMEM60Q9H2L4 133 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 DAXXQ9UER7 740 aaPredicted RBP20.13■□□□□ 0.81
RAB28-202ENST00000330852 DBR1Q9UK59 544 aaKnown RBP20.13■□□□□ 0.81
RAB28-202ENST00000330852 TDRD15B5MCY1 1934 aaKnown RBP20.13■□□□□ 0.81
RAB28-202ENST00000330852 ALDH2P05091 517 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 CTSAP10619 480 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 PLA2G5P39877 138 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 TRAPPC10P48553 1259 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 LONRF3Q496Y0 759 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 HACE1Q8IYU2 909 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 MCPH1Q8NEM0 835 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 ERMNQ8TAM6 284 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 FAM193BQ96PV7 902 aaPredicted RBP20.13■□□□□ 0.81
RAB28-202ENST00000330852 NACC1Q96RE7 527 aa20.13■□□□□ 0.81
RAB28-202ENST00000330852 INO80B-WBP1J3KQ70 363 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 INPPL1O15357 1258 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 TSPAN1O60635 241 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 ITGA4P13612 1032 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 MUTP22033 750 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 RBM10P98175 930 aaKnown RBP20.12■□□□□ 0.81
RAB28-202ENST00000330852 ITIH3Q06033 890 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 SYCE2Q6PIF2 218 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 FAM184AQ8NB25 1140 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 TMEM87AQ8NBN3 555 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 PIGOQ8TEQ8 1089 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 FAM122AQ96E09 287 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 CSRNP2Q9H175 543 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 HCFC2Q9Y5Z7 792 aa20.12■□□□□ 0.81
RAB28-202ENST00000330852 POTEMA6NI47 508 aa20.11■□□□□ 0.81
RAB28-202ENST00000330852 CLASP2O75122 1294 aaKnown RBP20.11■□□□□ 0.81
RAB28-202ENST00000330852 SPATA31C1P0DKV0 1188 aa20.11■□□□□ 0.81
RAB28-202ENST00000330852 ATP2B1P20020 1258 aa20.11■□□□□ 0.81
RAB28-202ENST00000330852 GUCY1B3Q02153 619 aa20.11■□□□□ 0.81
RAB28-202ENST00000330852 CAPSQ13938 189 aa20.11■□□□□ 0.81
RAB28-202ENST00000330852 CES5AQ6NT32 575 aa20.11■□□□□ 0.81
RAB28-202ENST00000330852 CATSPER3Q86XQ3 398 aa20.11■□□□□ 0.81
RAB28-202ENST00000330852 NECTIN4Q96NY8 510 aa20.11■□□□□ 0.81
RAB28-202ENST00000330852 DZANK1Q9NVP4 752 aa20.11■□□□□ 0.81
RAB28-202ENST00000330852 MUTYHQ9UIF7 546 aa20.11■□□□□ 0.81
RAB28-202ENST00000330852 OR52Z1P0C646 297 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 GLRA2P23416 452 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 RPA1P27694 616 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 SLC11A1P49279 550 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 MBTD1Q05BQ5 628 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 LLGL2Q6P1M3 1020 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 PPFIBP1Q86W92 1011 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 TMEM173Q86WV6 379 aaPredicted RBP20.1■□□□□ 0.81
RAB28-202ENST00000330852 ZNF280BQ86YH2 543 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 SMG8Q8ND04 991 aaKnown RBP20.1■□□□□ 0.81
RAB28-202ENST00000330852 ASAP3Q8TDY4 903 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 EDAQ92838 391 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 DNAJB4Q9UDY4 337 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 NOL7Q9UMY1 257 aaKnown RBP20.1■□□□□ 0.81
RAB28-202ENST00000330852 FAN1Q9Y2M0 1017 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 IPPQ9Y573 584 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 ZMYM2Q9UBW7 1377 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
RAB28-202ENST00000330852 NOSTRINQ8IVI9 506 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 PRIMPOLQ96LW4 560 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 KIF2CQ99661 725 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 GBP3Q9H0R5 595 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 POLR3FQ9H1D9 316 aaPredicted RBP20.1■□□□□ 0.81
RAB28-202ENST00000330852 ADAM7Q9H2U9 754 aa20.1■□□□□ 0.81
RAB28-202ENST00000330852 GIT1Q9Y2X7 761 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms