RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ZFXP17010 805 aaPredicted RBP9□□□□□ -0.97
SKA2-201ENST00000330137 TATP17735 454 aaPredicted RBP9□□□□□ -0.97
SKA2-201ENST00000330137 MUTP22033 750 aa9□□□□□ -0.97
SKA2-201ENST00000330137 RGS2P41220 211 aa9□□□□□ -0.97
SKA2-201ENST00000330137 PTGIRP43119 386 aa9□□□□□ -0.97
SKA2-201ENST00000330137 PHEXP78562 749 aa9□□□□□ -0.97
SKA2-201ENST00000330137 CAV1Q03135 178 aa9□□□□□ -0.97
SKA2-201ENST00000330137 IFIT5Q13325 482 aaKnown RBP9□□□□□ -0.97
SKA2-201ENST00000330137 CYP1B1Q16678 543 aa9□□□□□ -0.97
SKA2-201ENST00000330137 ZCWPW2Q504Y3 356 aa9□□□□□ -0.97
SKA2-201ENST00000330137 RBM26Q5T8P6 1007 aaKnown RBP9□□□□□ -0.97
SKA2-201ENST00000330137 ARMC3Q5W041 872 aa9□□□□□ -0.97
SKA2-201ENST00000330137 CGB2Q6NT52 195 aa9□□□□□ -0.97
SKA2-201ENST00000330137 TOM1L2Q6ZVM7 507 aa9□□□□□ -0.97
SKA2-201ENST00000330137 TRIM59Q8IWR1 403 aa9□□□□□ -0.97
SKA2-201ENST00000330137 ST13P4Q8IZP2 240 aaPredicted RBP9□□□□□ -0.97
SKA2-201ENST00000330137 ENAHQ8N8S7 591 aaPredicted RBP9□□□□□ -0.97
SKA2-201ENST00000330137 FBXO25Q8TCJ0 367 aa9□□□□□ -0.97
SKA2-201ENST00000330137 MORC4Q8TE76 937 aa9□□□□□ -0.97
SKA2-201ENST00000330137 UCMAQ8WVF2 138 aa9□□□□□ -0.97
SKA2-201ENST00000330137 LENG1Q96BZ8 264 aaPredicted RBP9□□□□□ -0.97
SKA2-201ENST00000330137 LZTS2Q9BRK4 669 aa9□□□□□ -0.97
SKA2-201ENST00000330137 LSM14BQ9BX40 385 aaKnown RBP9□□□□□ -0.97
SKA2-201ENST00000330137 LRRC4CQ9HCJ2 640 aa9□□□□□ -0.97
SKA2-201ENST00000330137 TIMMDC1Q9NPL8 285 aa9□□□□□ -0.97
SKA2-201ENST00000330137 TRIM33Q9UPN9 1127 aa9□□□□□ -0.97
SKA2-201ENST00000330137 TNKS1BP1Q9C0C2 1729 aaKnown RBP9□□□□□ -0.97
SKA2-201ENST00000330137 FRMPD4Q14CM0 1322 aa9□□□□□ -0.97
SKA2-201ENST00000330137 DDX3YO15523 660 aaKnown RBP9□□□□□ -0.97
SKA2-201ENST00000330137 ZPR1O75312 459 aa9□□□□□ -0.97
SKA2-201ENST00000330137 MBD4O95243 580 aa9□□□□□ -0.97
SKA2-201ENST00000330137 LYNP07948 512 aa9□□□□□ -0.97
SKA2-201ENST00000330137 TAC1P20366 129 aa9□□□□□ -0.97
SKA2-201ENST00000330137 CTNNA2P26232 953 aa9□□□□□ -0.97
SKA2-201ENST00000330137 SERPINB8P50452 374 aa9□□□□□ -0.97
SKA2-201ENST00000330137 PLTPP55058 493 aa9□□□□□ -0.97
SKA2-201ENST00000330137 XIAPP98170 497 aa9□□□□□ -0.97
SKA2-201ENST00000330137 MARK2Q7KZI7 788 aaKnown RBP9□□□□□ -0.97
SKA2-201ENST00000330137 CMTR1Q8N1G2 835 aaKnown RBP9□□□□□ -0.97
SKA2-201ENST00000330137 ZBTB8BQ8NAP8 495 aaPredicted RBP9□□□□□ -0.97
SKA2-201ENST00000330137 EPS8L3Q8TE67 593 aaKnown RBP9□□□□□ -0.97
SKA2-201ENST00000330137 ISCA1Q9BUE6 129 aa9□□□□□ -0.97
SKA2-201ENST00000330137 CELF4Q9BZC1 486 aaKnown RBP9□□□□□ -0.97
SKA2-201ENST00000330137 SEMA4AQ9H3S1 761 aa9□□□□□ -0.97
SKA2-201ENST00000330137 PTTG2Q9NZH5 202 aa9□□□□□ -0.97
SKA2-201ENST00000330137 WHRNQ9P202 907 aa9□□□□□ -0.97
SKA2-201ENST00000330137 ZNF148Q9UQR1 794 aa9□□□□□ -0.97
SKA2-201ENST00000330137 PCDHA3Q9Y5H8 950 aa9□□□□□ -0.97
SKA2-201ENST00000330137 CCDC194A0A1B0GVG4 234 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 C2CD2LO14523 706 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 RAD21O60216 631 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 T-ENOLP0DO92 83 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 FCER1AP12319 257 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 DNA2P51530 1060 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 INHBCP55103 352 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 RAPGEF1Q13905 1077 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 HNRNPDQ14103 355 aaKnown RBP8.99□□□□□ -0.97
SKA2-201ENST00000330137 RASA3Q14644 834 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 SYDE1Q6ZW31 735 aaPredicted RBP8.99□□□□□ -0.97
SKA2-201ENST00000330137 RELL1Q8IUW5 271 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 VGLL2Q8N8G2 317 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 PHC3Q8NDX5 983 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 ERP27Q96DN0 273 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 TRIM51Q9BSJ1 452 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 PACSIN1Q9BY11 444 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 PPCSQ9HAB8 311 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 ZDHHC7Q9NXF8 308 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 PAIP2BQ9ULR5 123 aaKnown RBP8.99□□□□□ -0.97
SKA2-201ENST00000330137 CHKBQ9Y259 395 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 PCDH11YQ9BZA8 1340 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 ATP6V1G1O75348 118 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 E2F6O75461 281 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 PRDM1O75626 825 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 TMEM253P0C7T8 217 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 ACADVLP49748 655 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 CDR2Q01850 454 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 PTK2Q05397 1052 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 PPATQ06203 517 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 FAM91A1Q658Y4 838 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 ADGRG6Q86SQ4 1221 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 ZC3H18Q86VM9 953 aaKnown RBP8.99□□□□□ -0.97
SKA2-201ENST00000330137 PASD1Q8IV76 773 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 SEPT12Q8IYM1 358 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 SUPT20HQ8NEM7 779 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 RFFLQ8WZ73 363 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 DCAF5Q96JK2 942 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 MPHOSPH6Q99547 160 aaKnown RBP8.99□□□□□ -0.97
SKA2-201ENST00000330137 TANGO6Q9C0B7 1094 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 KIAA1683Q9H0B3 1180 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 STK32BQ9NY57 414 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 SENP1Q9P0U3 644 aa8.99□□□□□ -0.97
SKA2-201ENST00000330137 ARMCX3Q9UH62 379 aaPredicted RBP8.99□□□□□ -0.97
SKA2-201ENST00000330137 SMAPO00193 183 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 DDX3XO00571 662 aaKnown RBP eCLIP8.98□□□□□ -0.97
SKA2-201ENST00000330137 PRPF4O43172 522 aaKnown RBP eCLIP8.98□□□□□ -0.97
SKA2-201ENST00000330137 AP1G1O43747 822 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 PFDN1O60925 122 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 CDH16O75309 829 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 PLEKHA8P1O95397 391 aa8.98□□□□□ -0.97
SKA2-201ENST00000330137 PSMG1O95456 288 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms