RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SPATA20Q8TB22 786 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 SPIRE2Q8WWL2 714 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 RAB17Q9H0T7 212 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 MLXIPLQ9NP71 852 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 TMEM119Q4V9L6 283 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 WDR59Q6PJI9 974 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 TRIM59Q8IWR1 403 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 OTUD6BQ8N6M0 293 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 CCDC63Q8NA47 563 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 OR2W6PQ8NHA6 318 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 SLC20A1Q8WUM9 679 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 MKL1Q969V6 931 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 HEXIM2Q96MH2 286 aaKnown RBP17.23■□□□□ 0.35
SYNM-201ENST00000328642 TRIM51Q9BSJ1 452 aa17.23■□□□□ 0.35
SYNM-201ENST00000328642 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
SYNM-201ENST00000328642 ZNF142P52746 1687 aaPredicted RBP17.23■□□□□ 0.35
SYNM-201ENST00000328642 POC1B-GALNT4F8VUJ3 575 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 KRT15P19012 456 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 NPTX2P47972 431 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 KCNJ6P48051 423 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 CARSP49589 748 aaKnown RBP17.22■□□□□ 0.35
SYNM-201ENST00000328642 RARRES1P49788 294 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 CCNA1P78396 465 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 ARSHQ5FYA8 562 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 LRRC15Q8TF66 581 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 HDAC7Q8WUI4 952 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 VWA5AO00534 786 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 ATP2A1O14983 1001 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 RGL2O15211 777 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 SLC12A3P55017 1021 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 GJC2Q5T442 439 aaPredicted RBP17.22■□□□□ 0.35
SYNM-201ENST00000328642 C9orf131Q5VYM1 1079 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 CASC4Q6P4E1 433 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 FBXO16Q8IX29 292 aaPredicted RBP17.22■□□□□ 0.35
SYNM-201ENST00000328642 MSANTD4Q8NCY6 345 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 NLGN2Q8NFZ4 835 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 ACSF2Q96CM8 615 aaPredicted RBP17.22■□□□□ 0.35
SYNM-201ENST00000328642 NAGPAQ9UK23 515 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 RGS16O15492 202 aaPredicted RBP17.22■□□□□ 0.35
SYNM-201ENST00000328642 SPATA31C1P0DKV0 1188 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 PDCLQ13371 301 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 LY6KQ17RY6 165 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 CATSPER4Q7RTX7 472 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 CTAGE3PQ8IX95 158 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 ZBTB45Q96K62 511 aaPredicted RBP17.22■□□□□ 0.35
SYNM-201ENST00000328642 AGPAT1Q99943 283 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 THAP2Q9H0W7 228 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 RAB20Q9NX57 234 aa17.22■□□□□ 0.35
SYNM-201ENST00000328642 NOC2LQ9Y3T9 749 aaKnown RBP17.22■□□□□ 0.35
SYNM-201ENST00000328642 GPC5P78333 572 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 DLG4P78352 724 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 EMC2Q15006 297 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 WDR72Q3MJ13 1102 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 ZNF564Q8TBZ8 553 aaPredicted RBP17.21■□□□□ 0.35
SYNM-201ENST00000328642 NGRNQ9NPE2 291 aaKnown RBP17.21■□□□□ 0.35
SYNM-201ENST00000328642 CLCN3P51790 818 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 EPHB4P54760 987 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 TERF2Q15554 542 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 MIIPQ5JXC2 388 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 DNAJC24Q6P3W2 148 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 CCDC89Q8N998 374 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.21■□□□□ 0.35
SYNM-201ENST00000328642 TAS1R2Q8TE23 839 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 ANKRD36BP1Q96IX9 119 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 RPF1Q9H9Y2 349 aaKnown RBP17.21■□□□□ 0.35
SYNM-201ENST00000328642 H0YCG3 227 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 GOLGA8MH3BSY2 632 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 STAM2O75886 525 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 PGM5Q15124 567 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 OR6B2Q6IFH4 312 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 TATDN1Q6P1N9 297 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 FAM83AQ86UY5 434 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 GPD1LQ8N335 351 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 ARFGAP2Q8N6H7 521 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 KCNMB3Q9NPA1 279 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 PXMP2Q9NR77 195 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 FBXO40Q9UH90 709 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 ODF2LQ9ULJ1 636 aa17.21■□□□□ 0.35
SYNM-201ENST00000328642 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.21■□□□□ 0.34
SYNM-201ENST00000328642 TTI1O43156 1089 aa17.21■□□□□ 0.34
SYNM-201ENST00000328642 SART1O43290 800 aaKnown RBP17.21■□□□□ 0.34
SYNM-201ENST00000328642 DGAT1O75907 488 aa17.21■□□□□ 0.34
SYNM-201ENST00000328642 DR1Q01658 176 aa17.21■□□□□ 0.34
SYNM-201ENST00000328642 NNTQ13423 1086 aa17.21■□□□□ 0.34
SYNM-201ENST00000328642 CBWD6Q4V339 395 aa17.21■□□□□ 0.34
SYNM-201ENST00000328642 XKR3Q5GH77 459 aa17.21■□□□□ 0.34
SYNM-201ENST00000328642 CBWD3Q5JTY5 395 aa17.21■□□□□ 0.34
SYNM-201ENST00000328642 CBWD5Q5RIA9 395 aa17.21■□□□□ 0.34
SYNM-201ENST00000328642 C10orf76Q5T2E6 689 aa17.21■□□□□ 0.34
SYNM-201ENST00000328642 NOVA2Q9UNW9 492 aaKnown RBP17.21■□□□□ 0.34
SYNM-201ENST00000328642 SGPL1O95470 568 aa17.2■□□□□ 0.34
SYNM-201ENST00000328642 CYP2C8P10632 490 aa17.2■□□□□ 0.34
SYNM-201ENST00000328642 NEK9Q8TD19 979 aa17.2■□□□□ 0.34
SYNM-201ENST00000328642 P2RX7Q99572 595 aaKnown RBP17.2■□□□□ 0.34
SYNM-201ENST00000328642 PLCD4Q9BRC7 762 aa17.2■□□□□ 0.34
SYNM-201ENST00000328642 PNMA2Q9UL42 364 aa17.2■□□□□ 0.34
SYNM-201ENST00000328642 ANO9A1A5B4 782 aa17.2■□□□□ 0.34
SYNM-201ENST00000328642 LRRC10BA6NIK2 292 aa17.2■□□□□ 0.34
SYNM-201ENST00000328642 KRT14P02533 472 aa17.2■□□□□ 0.34
SYNM-201ENST00000328642 CIITAP33076 1130 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms