RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 LMO3Q8TAP4 145 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 SCFD2Q8WU76 684 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 BBXQ8WY36 941 aaPredicted RBP16.25■□□□□ 0.19
TPM3-205ENST00000328159 POMGNT1Q8WZA1 660 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 COPS5Q92905 334 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 SECISBP2LQ93073 1101 aaKnown RBP16.25■□□□□ 0.19
TPM3-205ENST00000328159 BICD1Q96G01 975 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 STK33Q9BYT3 514 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 LUC7LQ9NQ29 371 aaKnown RBP16.25■□□□□ 0.19
TPM3-205ENST00000328159 PDGFCQ9NRA1 345 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 CDC23Q9UJX2 597 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 DNAJC12Q9UKB3 198 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 DIS3Q9Y2L1 958 aaKnown RBP16.25■□□□□ 0.19
TPM3-205ENST00000328159 MACROD2A1Z1Q3 448 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 STRNO43815 780 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 MAFO75444 373 aaPredicted RBP16.24■□□□□ 0.19
TPM3-205ENST00000328159 FERP16591 822 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 GARTP22102 1010 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 STAT1P42224 750 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 GCLMP48507 274 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 CETN1Q12798 172 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 STRN3Q13033 797 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 ABRAQ8N0Z2 381 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 DEPTORQ8TB45 409 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 FBXL18Q96ME1 805 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.24■□□□□ 0.19
TPM3-205ENST00000328159 APEX2Q9UBZ4 518 aa16.24■□□□□ 0.19
TPM3-205ENST00000328159 A0A087X0T9 212 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 TADA3O75528 432 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 FAM228BP0C875 321 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 PTK2Q05397 1052 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 EPC2Q52LR7 807 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 ZNF571Q7Z3V5 609 aaPredicted RBP16.23■□□□□ 0.19
TPM3-205ENST00000328159 TRIM50Q86XT4 487 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 GPD1LQ8N335 351 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 ATP8B4Q8TF62 1192 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 MFSD14AQ96MC6 490 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 PARK7Q99497 189 aaKnown RBP16.23■□□□□ 0.19
TPM3-205ENST00000328159 IVNS1ABPQ9Y6Y0 642 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 SRCAPQ6ZRS2 3230 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 F8VZ95 297 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 PMM2O15305 246 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 RFX1P22670 979 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 ANXA13P27216 316 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 MARK3P27448 753 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 SOX5P35711 763 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 LIG4P49917 911 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 MXI1P50539 228 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 DRAP1Q14919 205 aaPredicted RBP16.23■□□□□ 0.19
TPM3-205ENST00000328159 PLCB4Q15147 1175 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 ELF2Q15723 593 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 TMEM63BQ5T3F8 832 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 TMC2Q8TDI7 906 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 TMEM117Q9H0C3 514 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 VTA1Q9NP79 307 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 ADAMTS1Q9UHI8 967 aa16.23■□□□□ 0.19
TPM3-205ENST00000328159 EFCAB8A8MWE9 144 aa16.22■□□□□ 0.19
TPM3-205ENST00000328159 PIGRP01833 764 aa16.22■□□□□ 0.19
TPM3-205ENST00000328159 AMPD2Q01433 879 aa16.22■□□□□ 0.19
TPM3-205ENST00000328159 CAPSQ13938 189 aa16.22■□□□□ 0.19
TPM3-205ENST00000328159 ERCC6LQ2NKX8 1250 aa16.22■□□□□ 0.19
TPM3-205ENST00000328159 TAPT1Q6NXT6 567 aa16.22■□□□□ 0.19
TPM3-205ENST00000328159 ZNF467Q7Z7K2 595 aaPredicted RBP16.22■□□□□ 0.19
TPM3-205ENST00000328159 PARD3BQ8TEW8 1205 aa16.22■□□□□ 0.19
TPM3-205ENST00000328159 CCDC127Q96BQ5 260 aa16.22■□□□□ 0.19
TPM3-205ENST00000328159 PTPN18Q99952 460 aa16.22■□□□□ 0.19
TPM3-205ENST00000328159 SMARCAD1Q9H4L7 1026 aa16.22■□□□□ 0.19
TPM3-205ENST00000328159 LRRIQ3A6PVS8 624 aaPredicted RBP16.21■□□□□ 0.19
TPM3-205ENST00000328159 K7ERI5 159 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 TACC1O75410 805 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 GFPT2O94808 682 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 PNMA6AP0CW24 399 aaPredicted RBP16.21■□□□□ 0.19
TPM3-205ENST00000328159 SLC26A2P50443 739 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 ARHGAP1Q07960 439 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 CYP24A1Q07973 514 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 IER5Q5VY09 327 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 PHLDB3Q6NSJ2 640 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 GPR142Q7Z601 462 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 USP37Q86T82 979 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 FMNL3Q8IVF7 1028 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 EXOC8Q8IYI6 725 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 TRIM58Q8NG06 486 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 GPR88Q9GZN0 384 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 TMEM134Q9H6X4 195 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 USP20Q9Y2K6 914 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 STYXL1Q9Y6J8 313 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 TRPM7Q96QT4 1865 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 MYH10P35580 1976 aa16.21■□□□□ 0.19
TPM3-205ENST00000328159 RBM47A0AV96 593 aaKnown RBP16.21■□□□□ 0.18
TPM3-205ENST00000328159 ANO9A1A5B4 782 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 ZBTB42B2RXF5 422 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 ENC1O14682 589 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 GAS2O43903 313 aaKnown RBP16.21■□□□□ 0.18
TPM3-205ENST00000328159 EXTL3O43909 919 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 MOCS3O95396 460 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 ATP1A1P05023 1023 aaKnown RBP16.21■□□□□ 0.18
TPM3-205ENST00000328159 ENPEPQ07075 957 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 DRP2Q13474 957 aa16.21■□□□□ 0.18
TPM3-205ENST00000328159 WHAMMP3Q1A5X7 153 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms